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This page was generated on 2024-07-04 11:43 -0400 (Thu, 04 Jul 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4411
palomino6Windows Server 2022 Datacenterx644.4.1 (2024-06-14 ucrt) -- "Race for Your Life" 4413
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4395
kjohnson3macOS 13.6.5 Venturaarm644.4.1 (2024-06-14) -- "Race for Your Life" 4390
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.0 (2024-04-24) -- "Puppy Cup" 4407
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 433/2243HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cosmiq 1.39.0  (landing page)
David Fischer
Snapshot Date: 2024-07-03 14:00 -0400 (Wed, 03 Jul 2024)
git_url: https://git.bioconductor.org/packages/cosmiq
git_branch: devel
git_last_commit: dfffadb
git_last_commit_date: 2024-04-30 10:36:53 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino6Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    ERROR    ERROR  
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  


CHECK results for cosmiq on kjohnson3

To the developers/maintainers of the cosmiq package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cosmiq.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: cosmiq
Version: 1.39.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:cosmiq.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings cosmiq_1.39.0.tar.gz
StartedAt: 2024-07-03 22:34:10 -0400 (Wed, 03 Jul 2024)
EndedAt: 2024-07-03 22:34:14 -0400 (Wed, 03 Jul 2024)
EllapsedTime: 4.0 seconds
RetCode: 1
Status:   ERROR  
CheckDir: cosmiq.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:cosmiq.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings cosmiq_1.39.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/cosmiq.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.5
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘cosmiq/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cosmiq’ version ‘1.39.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘faahKO’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/Users/biocbuild/bbs-3.20-bioc/meat/cosmiq.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings