Back to Multiple platform build/check report for BioC 3.20:   simplified   long
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This page was generated on 2024-11-20 12:05 -0500 (Wed, 20 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4481
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4479
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4359
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4539
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4493
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 26/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
affyContam 1.64.0  (landing page)
V. Carey
Snapshot Date: 2024-11-19 13:40 -0500 (Tue, 19 Nov 2024)
git_url: https://git.bioconductor.org/packages/affyContam
git_branch: RELEASE_3_20
git_last_commit: c7cf836
git_last_commit_date: 2024-10-29 09:30:21 -0500 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    OK  

BUILD BIN results for affyContam on lconway

To the developers/maintainers of the affyContam package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/affyContam.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: affyContam
Version: 1.64.0
Command: rm -rf affyContam.buildbin-libdir && mkdir affyContam.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh affyContam_1.64.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R affyContam.buildbin-libdir
StartedAt: 2024-11-20 04:13:17 -0500 (Wed, 20 Nov 2024)
EndedAt: 2024-11-20 04:13:29 -0500 (Wed, 20 Nov 2024)
EllapsedTime: 11.5 seconds
RetCode: 0
Status:   OK  
PackageFile: affyContam_1.64.0.tgz
PackageFileSize: 304 KiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf affyContam.buildbin-libdir && mkdir affyContam.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh affyContam_1.64.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R affyContam.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=affyContam.buildbin-libdir affyContam_1.64.0.tar.gz'
>>>>>>> 

* installing *source* package ‘affyContam’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
     Package   
[1,] "affydata"
     LibPath                                                                
[1,] "/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library"
     Item       Title                        
[1,] "Dilution" "AffyBatch instance Dilution"
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
     Package   
[1,] "affydata"
     LibPath                                                                
[1,] "/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library"
     Item       Title                        
[1,] "Dilution" "AffyBatch instance Dilution"
** testing if installed package can be loaded from final location
     Package   
[1,] "affydata"
     LibPath                                                                
[1,] "/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library"
     Item       Title                        
[1,] "Dilution" "AffyBatch instance Dilution"
** testing if installed package keeps a record of temporary installation path
* DONE (affyContam)