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This page was generated on 2024-12-23 12:05 -0500 (Mon, 23 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4744
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4487
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4515
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4467
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2226/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UniProt.ws 2.46.1  (landing page)
Marcel Ramos
Snapshot Date: 2024-12-19 13:00 -0500 (Thu, 19 Dec 2024)
git_url: https://git.bioconductor.org/packages/UniProt.ws
git_branch: RELEASE_3_20
git_last_commit: 87f026f
git_last_commit_date: 2024-11-05 20:40:28 -0500 (Tue, 05 Nov 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    TIMEOUT  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    TIMEOUT  skippedskipped

BUILD results for UniProt.ws on palomino8

To the developers/maintainers of the UniProt.ws package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/UniProt.ws.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: UniProt.ws
Version: 2.46.1
Command: chmod a+r UniProt.ws -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data UniProt.ws
StartedAt: 2024-12-19 22:30:54 -0500 (Thu, 19 Dec 2024)
EndedAt: 2024-12-19 22:31:40 -0500 (Thu, 19 Dec 2024)
EllapsedTime: 45.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r UniProt.ws -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data UniProt.ws
###
##############################################################################
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* checking for file 'UniProt.ws/DESCRIPTION' ... OK
* preparing 'UniProt.ws':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'UniProt.ws.Rmd' using rmarkdown

Quitting from lines 66-67 [availSpecies] (UniProt.ws.Rmd)
Error: processing vignette 'UniProt.ws.Rmd' failed with diagnostics:
Timeout was reached [ftp.uniprot.org]: SSL/TLS connection timeout
--- failed re-building 'UniProt.ws.Rmd'

SUMMARY: processing the following file failed:
  'UniProt.ws.Rmd'

Error: Vignette re-building failed.
Execution halted