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This page was generated on 2024-12-23 12:06 -0500 (Mon, 23 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4744
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4487
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4515
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4467
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1978/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SingleMoleculeFootprinting 2.0.0  (landing page)
Guido Barzaghi
Snapshot Date: 2024-12-19 13:00 -0500 (Thu, 19 Dec 2024)
git_url: https://git.bioconductor.org/packages/SingleMoleculeFootprinting
git_branch: RELEASE_3_20
git_last_commit: 4d5ea07
git_last_commit_date: 2024-10-29 11:00:56 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  YES
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  YES
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  YES
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  YES


BUILD BIN results for SingleMoleculeFootprinting on merida1

To the developers/maintainers of the SingleMoleculeFootprinting package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleMoleculeFootprinting.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SingleMoleculeFootprinting
Version: 2.0.0
Command: rm -rf SingleMoleculeFootprinting.buildbin-libdir && mkdir SingleMoleculeFootprinting.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh SingleMoleculeFootprinting_2.0.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R SingleMoleculeFootprinting.buildbin-libdir
StartedAt: 2024-12-20 13:25:21 -0500 (Fri, 20 Dec 2024)
EndedAt: 2024-12-20 13:28:07 -0500 (Fri, 20 Dec 2024)
EllapsedTime: 165.8 seconds
RetCode: 0
Status:   OK  
PackageFile: SingleMoleculeFootprinting_2.0.0.tgz
PackageFileSize: 4.259 MiB

Command output

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###
### Running command:
###
###   rm -rf SingleMoleculeFootprinting.buildbin-libdir && mkdir SingleMoleculeFootprinting.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh SingleMoleculeFootprinting_2.0.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R SingleMoleculeFootprinting.buildbin-libdir
###
##############################################################################
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=SingleMoleculeFootprinting.buildbin-libdir SingleMoleculeFootprinting_2.0.0.tar.gz'
>>>>>>> 

* installing *source* package ‘SingleMoleculeFootprinting’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘Biostrings::setequal’ by ‘dplyr::setequal’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::intersect’ by ‘dplyr::intersect’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::union’ by ‘dplyr::union’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::combine’ by ‘dplyr::combine’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Biostrings::collapse’ by ‘dplyr::collapse’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::setdiff’ by ‘dplyr::setdiff’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::Position’ by ‘ggplot2::Position’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::boxplot’ by ‘graphics::boxplot’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Matrix::image’ by ‘graphics::image’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::between’ by ‘plyranges::between’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n_distinct’ by ‘plyranges::n_distinct’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n’ by ‘plyranges::n’ when loading ‘SingleMoleculeFootprinting’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘Biostrings::setequal’ by ‘dplyr::setequal’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::intersect’ by ‘dplyr::intersect’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::union’ by ‘dplyr::union’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::combine’ by ‘dplyr::combine’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Biostrings::collapse’ by ‘dplyr::collapse’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::setdiff’ by ‘dplyr::setdiff’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::Position’ by ‘ggplot2::Position’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::boxplot’ by ‘graphics::boxplot’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Matrix::image’ by ‘graphics::image’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::between’ by ‘plyranges::between’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n_distinct’ by ‘plyranges::n_distinct’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n’ by ‘plyranges::n’ when loading ‘SingleMoleculeFootprinting’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘Biostrings::setequal’ by ‘dplyr::setequal’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::intersect’ by ‘dplyr::intersect’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::union’ by ‘dplyr::union’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::combine’ by ‘dplyr::combine’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Biostrings::collapse’ by ‘dplyr::collapse’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::setdiff’ by ‘dplyr::setdiff’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::Position’ by ‘ggplot2::Position’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::boxplot’ by ‘graphics::boxplot’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Matrix::image’ by ‘graphics::image’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::between’ by ‘plyranges::between’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n_distinct’ by ‘plyranges::n_distinct’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n’ by ‘plyranges::n’ when loading ‘SingleMoleculeFootprinting’
** testing if installed package keeps a record of temporary installation path
* DONE (SingleMoleculeFootprinting)