Back to Multiple platform build/check report for BioC 3.23:   simplified   long
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2026-04-29 10:15 -0400 (Wed, 29 Apr 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.4 LTS)x86_644.6.0 RC (2026-04-17 r89917) -- "Because it was There" 4988
kjohnson3macOS 13.7.7 Venturaarm644.6.0 Patched (2026-04-24 r89963) -- "Because it was There" 4694
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1443/2415HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MultiBaC 1.22.0  (landing page)
The package maintainer
Snapshot Date: 2026-04-28 14:14 -0400 (Tue, 28 Apr 2026)
git_url: https://git.bioconductor.org/packages/MultiBaC
git_branch: RELEASE_3_23
git_last_commit: 6d415c2
git_last_commit_date: 2026-04-28 08:53:09 -0400 (Tue, 28 Apr 2026)
nebbiolo1Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  YES
kjohnson3macOS 13.7.7 Ventura / arm64  OK    OK    OK    OK  YES
See other builds for MultiBaC in R Universe.


CHECK results for MultiBaC on nebbiolo1

To the developers/maintainers of the MultiBaC package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MultiBaC.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MultiBaC
Version: 1.22.0
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:MultiBaC.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings MultiBaC_1.22.0.tar.gz
StartedAt: 2026-04-29 02:55:15 -0400 (Wed, 29 Apr 2026)
EndedAt: 2026-04-29 02:58:36 -0400 (Wed, 29 Apr 2026)
EllapsedTime: 201.3 seconds
RetCode: 0
Status:   OK  
CheckDir: MultiBaC.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:MultiBaC.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings MultiBaC_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/MultiBaC.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-29 06:55:15 UTC
* checking for file ‘MultiBaC/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MultiBaC’ version ‘1.22.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MultiBaC’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                    user system elapsed
inner_relPlot     12.777  1.238  14.018
plot              11.608  0.457  12.066
plot_pca          11.778  0.274  12.053
explained_varPlot 11.526  0.076  11.603
batchCorrection   11.269  0.223  11.493
MultiBaC          10.989  0.189  11.180
Q2_plot           10.855  0.087  10.945
ARSyNbac           9.177  0.399   9.584
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: OK


Installation output

MultiBaC.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL MultiBaC
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’
* installing *source* package ‘MultiBaC’ ...
** this is package ‘MultiBaC’ version ‘1.22.0’
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MultiBaC)

Tests output


Example timings

MultiBaC.Rcheck/MultiBaC-Ex.timings

nameusersystemelapsed
ARSyNbac9.1770.3999.584
MultiBaC10.989 0.18911.180
Q2_plot10.855 0.08710.945
batchCorrection11.269 0.22311.493
batchEstPlot1.0310.0361.067
createMbac0.3150.0000.315
explained_varPlot11.526 0.07611.603
genMissingOmics0.8400.0070.849
genModelList0.3970.0010.397
inner_relPlot12.777 1.23814.018
multiyeast0.0020.0000.002
plot11.608 0.45712.066
plot_pca11.778 0.27412.053
summary0.3230.0000.323