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This page was generated on 2024-11-20 12:06 -0500 (Wed, 20 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4481
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4479
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4359
lconwaymacOS 12.7.1 Montereyx86_644.4.1 (2024-06-14) -- "Race for Your Life" 4539
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.4.1 (2024-06-14) -- "Race for Your Life" 4493
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1358/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSstatsShiny 1.8.0  (landing page)
Devon Kohler
Snapshot Date: 2024-11-19 13:40 -0500 (Tue, 19 Nov 2024)
git_url: https://git.bioconductor.org/packages/MSstatsShiny
git_branch: RELEASE_3_20
git_last_commit: 5f27eb7
git_last_commit_date: 2024-10-29 11:16:23 -0500 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  NO, package depends on 'MSstatsPTM' which is not available
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  NO, package depends on 'MSstatsPTM' which is not available
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    WARNINGS  

BUILD BIN results for MSstatsShiny on lconway

To the developers/maintainers of the MSstatsShiny package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MSstatsShiny.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MSstatsShiny
Version: 1.8.0
Command: rm -rf MSstatsShiny.buildbin-libdir && mkdir MSstatsShiny.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh MSstatsShiny_1.8.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R MSstatsShiny.buildbin-libdir
StartedAt: 2024-11-20 04:38:54 -0500 (Wed, 20 Nov 2024)
EndedAt: 2024-11-20 04:39:28 -0500 (Wed, 20 Nov 2024)
EllapsedTime: 34.5 seconds
RetCode: 0
Status:   OK  
PackageFile: MSstatsShiny_1.8.0.tgz
PackageFileSize: 2.293 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf MSstatsShiny.buildbin-libdir && mkdir MSstatsShiny.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh MSstatsShiny_1.8.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R MSstatsShiny.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=MSstatsShiny.buildbin-libdir MSstatsShiny_1.8.0.tar.gz'
>>>>>>> 

* installing *source* package ‘MSstatsShiny’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
** testing if installed package keeps a record of temporary installation path
* DONE (MSstatsShiny)