Back to Multiple platform build/check report for BioC 3.22:   simplified   long
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2025-10-31 12:05 -0400 (Fri, 31 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4901
lconwaymacOS 12.7.6 Montereyx86_644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4691
kjohnson3macOS 13.7.7 Venturaarm644.5.1 Patched (2025-09-10 r88807) -- "Great Square Root" 4637
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1286/2361HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MGFR 1.36.0  (landing page)
Khadija El Amrani
Snapshot Date: 2025-10-30 13:45 -0400 (Thu, 30 Oct 2025)
git_url: https://git.bioconductor.org/packages/MGFR
git_branch: RELEASE_3_22
git_last_commit: 65ebe6e
git_last_commit_date: 2025-10-29 10:33:04 -0400 (Wed, 29 Oct 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped
lconwaymacOS 12.7.6 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.7.7 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for MGFR on kjohnson3

To the developers/maintainers of the MGFR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MGFR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MGFR
Version: 1.36.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MGFR
StartedAt: 2025-10-30 17:00:09 -0400 (Thu, 30 Oct 2025)
EndedAt: 2025-10-30 17:00:21 -0400 (Thu, 30 Oct 2025)
EllapsedTime: 12.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MGFR
###
##############################################################################
##############################################################################


* checking for file ‘MGFR/DESCRIPTION’ ... OK
* preparing ‘MGFR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MGFR.Rnw’ using Sweave

Error: processing vignette 'MGFR.Rnw' failed with diagnostics:
 chunk 4 (label = reference) 
Error in req_perform(request) : Failed to perform HTTP request.
Caused by error in `curl::curl_fetch_memory()`:
! SSL connect error [www.ensembl.org]:
TLS connect error: error:1404B42E:SSL routines:ST_CONNECT:tlsv1 alert protocol version

--- failed re-building ‘MGFR.Rnw’

SUMMARY: processing the following file failed:
  ‘MGFR.Rnw’

Error: Vignette re-building failed.
Execution halted