Back to Multiple platform build/check report for BioC 3.20:   simplified   long
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-06-11 15:40 -0400 (Tue, 11 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" 4679
palomino4Windows Server 2022 Datacenterx644.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" 4414
merida1macOS 12.7.4 Montereyx86_644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4441
kjohnson1macOS 13.6.6 Venturaarm644.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" 4394
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 789/2239HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneSelectMMD 2.49.0  (landing page)
Weiliang Qiu
Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024)
git_url: https://git.bioconductor.org/packages/GeneSelectMMD
git_branch: devel
git_last_commit: e11f54f
git_last_commit_date: 2024-04-30 10:19:40 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.4 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published


INSTALL results for GeneSelectMMD on palomino4

To the developers/maintainers of the GeneSelectMMD package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeneSelectMMD.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: GeneSelectMMD
Version: 2.49.0
Command: F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL GeneSelectMMD
StartedAt: 2024-06-09 15:45:51 -0400 (Sun, 09 Jun 2024)
EndedAt: 2024-06-09 15:46:17 -0400 (Sun, 09 Jun 2024)
EllapsedTime: 26.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL GeneSelectMMD
###
##############################################################################
##############################################################################


* installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library'
* installing *source* package 'GeneSelectMMD' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.2.0'
using Fortran compiler: 'GNU Fortran (GCC) 13.2.0'
gcc  -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG     -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c GeneSelectMMD_init.c -o GeneSelectMMD_init.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c Qfunc.f -o Qfunc.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c blas.f -o blas.o
gcc  -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG     -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c isnan.c -o isnan.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c lbfgsb.f -o lbfgsb.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c lbfgsbDriver.f -o lbfgsbDriver.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c linpack.f -o linpack.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c llkhFun.f -o llkhFun.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c myTtest.f -o myTtest.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c paraEstLoop.f -o paraEstLoop.o
gcc  -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG     -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c pt.c -o pt.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c timer.f -o timer.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c wiFun.f -o wiFun.o
gcc -shared -s -static-libgcc -o GeneSelectMMD.dll tmp.def GeneSelectMMD_init.o Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -lgfortran -lm -lquadmath -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-GeneSelectMMD/00new/GeneSelectMMD/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeneSelectMMD)