Alejandro Quiroz-Zarate
| Snapshot Date: 2024-11-19 13:40 -0500 (Tue, 19 Nov 2024) |
| git_url: https://git.bioconductor.org/packages/BAGS |
| git_branch: RELEASE_3_20 |
| git_last_commit: b690806 |
| git_last_commit_date: 2024-10-29 09:39:57 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-11-20 12:07 -0500 (Wed, 20 Nov 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4481 |
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4479 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4359 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4539 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 124/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BAGS 2.46.0 (landing page) Alejandro Quiroz-Zarate
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the BAGS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BAGS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: BAGS |
| Version: 2.46.0 |
| Command: /home/biocbuild/R/R/bin/R CMD INSTALL BAGS |
| StartedAt: 2024-11-19 20:27:16 -0000 (Tue, 19 Nov 2024) |
| EndedAt: 2024-11-19 20:27:25 -0000 (Tue, 19 Nov 2024) |
| EllapsedTime: 8.8 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
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###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD INSTALL BAGS
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’
* installing *source* package ‘BAGS’ ...
** using staged installation
** libs
using C compiler: ‘gcc (conda-forge gcc 14.2.0-1) 14.2.0’
gcc -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -c BAGS.c -o BAGS.o
In file included from BAGS.c:8:
FuncionesFast-Final.h: In function 'BetaFunCSDiff2':
FuncionesFast-Final.h:145:70: warning: unused variable 'YMu1' [-Wunused-variable]
145 | double media1,media,varianza1,varianza,resultado,varaux0,varaux1,YMu1;
| ^~~~
FuncionesFast-Final.h: In function 'AlfaFunCS':
FuncionesFast-Final.h:166:105: warning: unused variable 'MediaDiff' [-Wunused-variable]
166 | double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff;
| ^~~~~~~~~
FuncionesFast-Final.h:166:94: warning: unused variable 'A' [-Wunused-variable]
166 | double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff;
| ^
FuncionesFast-Final.h:166:92: warning: unused variable 'C' [-Wunused-variable]
166 | double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff;
| ^
BAGS.c: In function 'Gibbs5':
BAGS.c:25:48: warning: unused variable 'resI' [-Wunused-variable]
25 | double escala1,escala2,escala3,escala,rate,resI;
| ^~~~
BAGS.c:25:43: warning: unused variable 'rate' [-Wunused-variable]
25 | double escala1,escala2,escala3,escala,rate,resI;
| ^~~~
BAGS.c:25:36: warning: unused variable 'escala' [-Wunused-variable]
25 | double escala1,escala2,escala3,escala,rate,resI;
| ^~~~~~
BAGS.c:25:28: warning: unused variable 'escala3' [-Wunused-variable]
25 | double escala1,escala2,escala3,escala,rate,resI;
| ^~~~~~~
BAGS.c:25:20: warning: unused variable 'escala2' [-Wunused-variable]
25 | double escala1,escala2,escala3,escala,rate,resI;
| ^~~~~~~
BAGS.c:25:12: warning: unused variable 'escala1' [-Wunused-variable]
25 | double escala1,escala2,escala3,escala,rate,resI;
| ^~~~~~~
BAGS.c:24:12: warning: unused variable 'formaAux' [-Wunused-variable]
24 | double formaAux;
| ^~~~~~~~
BAGS.c:18:80: warning: variable 'ResSgmA' set but not used [-Wunused-but-set-variable]
18 | double ResRho1,ResRho2,ResRho3,ResRho4,ResSgmA1,ResSgmA2,ResSgmA3,ResSgmA4,ResSgmA;
| ^~~~~~~
BAGS.c:15:15: warning: variable 'AaPi' set but not used [-Wunused-but-set-variable]
15 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
| ^~~~
BAGS.c: In function 'Gibbs4':
BAGS.c:342:48: warning: unused variable 'resI' [-Wunused-variable]
342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~
BAGS.c:342:43: warning: unused variable 'rate' [-Wunused-variable]
342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~
BAGS.c:342:36: warning: unused variable 'escala' [-Wunused-variable]
342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~
BAGS.c:342:28: warning: unused variable 'escala3' [-Wunused-variable]
342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:342:20: warning: unused variable 'escala2' [-Wunused-variable]
342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:342:12: warning: unused variable 'escala1' [-Wunused-variable]
342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:341:12: warning: unused variable 'formaAux' [-Wunused-variable]
341 | double formaAux;
| ^~~~~~~~
BAGS.c:335:63: warning: variable 'ResSgmA' set but not used [-Wunused-but-set-variable]
335 | double ResRho1,ResRho2,ResRho3,ResSgmA1,ResSgmA2,ResSgmA3,ResSgmA;
| ^~~~~~~
BAGS.c:332:15: warning: variable 'AaPi' set but not used [-Wunused-but-set-variable]
332 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
| ^~~~
BAGS.c: In function 'Gibbs3':
BAGS.c:593:48: warning: unused variable 'resI' [-Wunused-variable]
593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~
BAGS.c:593:43: warning: unused variable 'rate' [-Wunused-variable]
593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~
BAGS.c:593:36: warning: unused variable 'escala' [-Wunused-variable]
593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~
BAGS.c:593:28: warning: unused variable 'escala3' [-Wunused-variable]
593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:593:20: warning: unused variable 'escala2' [-Wunused-variable]
593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:593:12: warning: unused variable 'escala1' [-Wunused-variable]
593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:592:12: warning: unused variable 'formaAux' [-Wunused-variable]
592 | double formaAux;
| ^~~~~~~~
BAGS.c:586:46: warning: variable 'ResSgmA' set but not used [-Wunused-but-set-variable]
586 | double ResRho1,ResRho2,ResSgmA1,ResSgmA2,ResSgmA;
| ^~~~~~~
BAGS.c:583:15: warning: variable 'AaPi' set but not used [-Wunused-but-set-variable]
583 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
| ^~~~
BAGS.c: In function 'Gibbs2':
BAGS.c:786:48: warning: unused variable 'resI' [-Wunused-variable]
786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~
BAGS.c:786:43: warning: unused variable 'rate' [-Wunused-variable]
786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~
BAGS.c:786:36: warning: unused variable 'escala' [-Wunused-variable]
786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~
BAGS.c:786:28: warning: unused variable 'escala3' [-Wunused-variable]
786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:786:20: warning: unused variable 'escala2' [-Wunused-variable]
786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:786:12: warning: unused variable 'escala1' [-Wunused-variable]
786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda
| ^~~~~~~
BAGS.c:785:12: warning: unused variable 'formaAux' [-Wunused-variable]
785 | double formaAux;
| ^~~~~~~~
BAGS.c:779:29: warning: variable 'ResSgmA' set but not used [-Wunused-but-set-variable]
779 | double ResRho1,ResSgmA1,ResSgmA;
| ^~~~~~~
BAGS.c:776:15: warning: variable 'AaPi' set but not used [-Wunused-but-set-variable]
776 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2;
| ^~~~
gcc -shared -L/home/biocbuild/R/R-4.4.1/lib -L/usr/local/lib -o BAGS.so BAGS.o -L/home/biocbuild/R/R-4.4.1/lib -lR
installing to /home/biocbuild/R/R-4.4.1/site-library/00LOCK-BAGS/00new/BAGS/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BAGS)