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### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:synapterdata.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings synapterdata_1.45.1.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.22-data-experiment/meat/synapterdata.Rcheck’
* using R version 4.5.0 beta (2025-04-02 r88102)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.2 LTS
* using session charset: UTF-8
* checking for file ‘synapterdata/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘synapterdata’ version ‘1.45.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘synapterdata’ can be installed ... OK
* checking installed package size ... INFO
  installed size is 422.5Mb
  sub-directories of 1Mb or more:
    data      28.0Mb
    extdata  394.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... NOTE
Auto-generated content requiring editing in Rd file 'getMasterRds.Rd':
  \details: ‘TODO If necessary, more details than the description above’
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.22-data-experiment/meat/synapterdata.Rcheck/00check.log’
for details.

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### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL synapterdata
###
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* installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’
* installing *source* package ‘synapterdata’ ...
** this is package ‘synapterdata’ version ‘1.45.1’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning message:
In fun(libname, pkgname) :
  Package 'synapter' is deprecated and will be removed from Bioconductor
  version 3.22
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
Warning in fun(libname, pkgname) :
  Package 'synapter' is deprecated and will be removed from Bioconductor
  version 3.22
Warning in fun(libname, pkgname) :
  Package 'synapterdata' is deprecated and will be removed from
  Bioconductor version 3.22
** testing if installed package can be loaded from final location
Warning in fun(libname, pkgname) :
  Package 'synapter' is deprecated and will be removed from Bioconductor
  version 3.22
Warning in fun(libname, pkgname) :
  Package 'synapterdata' is deprecated and will be removed from
  Bioconductor version 3.22
** testing if installed package keeps a record of temporary installation path
* DONE (synapterdata)