Back to Build/check report for BioC 3.22 experimental data
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2025-08-21 15:41 -0400 (Thu, 21 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4819
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 322/430HostnameOS / ArchINSTALLBUILDCHECK
RforProteomics 1.47.2  (landing page)
Laurent Gatto
Snapshot Date: 2025-08-21 07:30 -0400 (Thu, 21 Aug 2025)
git_url: https://git.bioconductor.org/packages/RforProteomics
git_branch: devel
git_last_commit: 95e1782
git_last_commit_date: 2025-08-20 01:43:13 -0400 (Wed, 20 Aug 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for RforProteomics on nebbiolo2

To the developers/maintainers of the RforProteomics package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: RforProteomics
Version: 1.47.2
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RforProteomics
StartedAt: 2025-08-21 11:37:27 -0400 (Thu, 21 Aug 2025)
EndedAt: 2025-08-21 11:37:28 -0400 (Thu, 21 Aug 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RforProteomics
###
##############################################################################
##############################################################################


* checking for file ‘RforProteomics/DESCRIPTION’ ... OK
* preparing ‘RforProteomics’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘RforProteomics’ ...
** this is package ‘RforProteomics’ version ‘1.47.2’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: package ‘MSnbase’ 2.35.1 was found, but >= 2.35.2 is required by ‘RforProteomics’
Execution halted
ERROR: lazy loading failed for package ‘RforProteomics’
* removing ‘/tmp/Rtmpwpn0Jp/Rinst595a567898b0f/RforProteomics’
      -----------------------------------
ERROR: package installation failed