Back to Books build report for BioC 3.24

This page was generated on 2026-05-04 14:30 -0400 (Mon, 04 May 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.4 LTS)x86_644.6.0 RC (2026-04-17 r89917) -- "Because it was There" 4844
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 3/13HostnameOS / ArchINSTALLBUILDCHECK
OHCA 1.9.0  (landing page)
Jacques Serizay
Snapshot Date: 2026-05-04 07:30 -0400 (Mon, 04 May 2026)
git_url: https://git.bioconductor.org/packages/OHCA
git_branch: devel
git_last_commit: 6b215aa
git_last_commit_date: 2026-04-28 08:53:51 -0400 (Tue, 28 Apr 2026)
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  NO, package depends on 'HiCool' which is not available


BUILD results for OHCA on nebbiolo2

To the developers/maintainers of the OHCA package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: OHCA
Version: 1.9.0
Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OHCA
StartedAt: 2026-05-04 07:47:24 -0400 (Mon, 04 May 2026)
EndedAt: 2026-05-04 08:17:04 -0400 (Mon, 04 May 2026)
EllapsedTime: 1779.6 seconds
RetCode: 0
Status:   OK  
PackageFile: OHCA_1.9.0.tar.gz
PackageFileSize: 23.86 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data OHCA
###
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* checking for file ‘OHCA/DESCRIPTION’ ... OK
* preparing ‘OHCA’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Omitted ‘LazyData’ from DESCRIPTION
* creating default NAMESPACE file
* building ‘OHCA_1.9.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘OHCA/inst/doc/book/site_libs/quarto-html/quarto-syntax-highlighting-c1f63da3e08f13bc72dc17e92cfd001d.css’