| Back to Rapid builds (Linux only) of a subset of BioC 3.21 Report updated every 6 hours |
This page was generated on 2025-02-05 10:04 -0500 (Wed, 05 Feb 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 869 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 105/217 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
| GOstats 2.73.0 (landing page) Bioconductor Package Maintainer
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||
|
To the developers/maintainers of the GOstats package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: GOstats |
| Version: 2.73.0 |
| Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GOstats |
| StartedAt: 2025-02-05 07:00:02 -0500 (Wed, 05 Feb 2025) |
| EndedAt: 2025-02-05 07:08:29 -0500 (Wed, 05 Feb 2025) |
| EllapsedTime: 506.9 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data GOstats ### ############################################################################## ############################################################################## * checking for file ‘GOstats/DESCRIPTION’ ... OK * preparing ‘GOstats’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘GOstatsForUnsupportedOrganisms.Rmd’ using rmarkdown Warning: call dbDisconnect() when finished working with a connection [WARNING] Could not parse YAML metadata at line 19 column 1: :2:68: Unexpected ' ' [WARNING] This document format requires a nonempty <title> element. Please specify either 'title' or 'pagetitle' in the metadata, e.g. by using --metadata pagetitle="..." on the command line. Falling back to 'GOstatsForUnsupportedOrganisms.knit' --- finished re-building ‘GOstatsForUnsupportedOrganisms.Rmd’ --- re-building ‘GOstatsHyperG.Rmd’ using rmarkdown --- finished re-building ‘GOstatsHyperG.Rmd’ --- re-building ‘GOvis.Rmd’ using rmarkdown Warning in doTryCatch(return(expr), name, parentenv, handler) : "nodeAttrs" is not a graphical parameter Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Warning in doTryCatch(return(expr), name, parentenv, handler) : zero-length arrow is of indeterminate angle and so skipped Killed