Rapid builds (Linux only) of a subset of BioC 3.23<BR>Report updated every 6 hours

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2025-10-28 r88973) -- "Unsuffered Consequences"	925
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CHECK results for graph on teran2

To the developers/maintainers of the graph package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graph

Version: 1.89.1

Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD check --install=check:graph.install-out.txt --library=/home/rapidbuild/bbs-3.23-bioc-rapid/R/site-library --timings graph_1.89.1.tar.gz

StartedAt: 2025-12-08 13:36:41 -0500 (Mon, 08 Dec 2025)

EndedAt: 2025-12-08 13:36:44 -0500 (Mon, 08 Dec 2025)

EllapsedTime: 3.0 seconds

RetCode: 1

Status: ERROR

CheckDir: graph.Rcheck

Warnings: NA

Command output

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### Running command:
###
###   /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD check --install=check:graph.install-out.txt --library=/home/rapidbuild/bbs-3.23-bioc-rapid/R/site-library --timings graph_1.89.1.tar.gz
###
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* using log directory ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/graph.Rcheck’
* using R Under development (unstable) (2025-10-28 r88973)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graph/DESCRIPTION’ ... OK
* this is package ‘graph’ version ‘1.89.1’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Bioconductor Package Maintainer <maintainer@bioconductor.org>’

Unknown, possibly misspelled, fields in DESCRIPTION:
  ‘git_url’ ‘git_branch’ ‘git_last_commit’ ‘git_last_commit_date’

The Title field starts with the package name.
The Title field should be in title case. Current version is:
  ‘graph: A package to handle graph data structures’
In title case that is:
  ‘Graph: A Package to Handle Graph Data Structures’

The Description field should not start with the package name,
  'This package' or similar.
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Files named as vignettes but with no recognized vignette engine:
   ‘inst/doc/GraphClass.Rmd’
   ‘inst/doc/MultiGraphClass.Rmd’
   ‘inst/doc/clusterGraph.Rmd’
   ‘inst/doc/graph.Rmd’
   ‘inst/doc/graphAttributes.Rmd’
(Is a VignetteBuilder field missing?)

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/graph.Rcheck/00check.log’
for details.

CHECK results for graph on teran2

Summary

Command output

Installation output

Tests output

Example timings