Back to Rapid builds (Linux only) of a subset of BioC 3.22 Report updated every 6 hours |
This page was generated on 2025-10-14 16:08 -0400 (Tue, 14 Oct 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
teran2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.1 (2025-06-13) -- "Great Square Root" | 925 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 45/229 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
bluster 1.19.0 (landing page) Aaron Lun
| teran2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||
To the developers/maintainers of the bluster package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: bluster |
Version: 1.19.0 |
Command: /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data bluster |
StartedAt: 2025-10-14 12:35:56 -0400 (Tue, 14 Oct 2025) |
EndedAt: 2025-10-14 12:37:02 -0400 (Tue, 14 Oct 2025) |
EllapsedTime: 66.6 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data bluster ### ############################################################################## ############################################################################## * checking for file ‘bluster/DESCRIPTION’ ... OK * preparing ‘bluster’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘clusterRows.Rmd’ using rmarkdown --- finished re-building ‘clusterRows.Rmd’ --- re-building ‘diagnostics.Rmd’ using rmarkdown Quitting from diagnostics.Rmd:141-149 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ NULL ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'diagnostics.Rmd' failed with diagnostics: Cannot create a graph object because the adjacency matrix contains NAs. --- failed re-building ‘diagnostics.Rmd’ SUMMARY: processing the following file failed: ‘diagnostics.Rmd’ Error: Vignette re-building failed. Execution halted