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This page was generated on 2025-10-14 16:08 -0400 (Tue, 14 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 925
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Package 45/229HostnameOS / ArchINSTALLBUILDCHECK
bluster 1.19.0  (landing page)
Aaron Lun
Snapshot Date: 2025-10-14 12:00 -0400 (Tue, 14 Oct 2025)
git_url: https://git.bioconductor.org/packages/bluster
git_branch: devel
git_last_commit: e860f35
git_last_commit_date: 2025-04-15 12:04:57 -0400 (Tue, 15 Apr 2025)
teran2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for bluster on teran2

To the developers/maintainers of the bluster package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: bluster
Version: 1.19.0
Command: /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data bluster
StartedAt: 2025-10-14 12:35:56 -0400 (Tue, 14 Oct 2025)
EndedAt: 2025-10-14 12:37:02 -0400 (Tue, 14 Oct 2025)
EllapsedTime: 66.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.22-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data bluster
###
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* checking for file ‘bluster/DESCRIPTION’ ... OK
* preparing ‘bluster’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘clusterRows.Rmd’ using rmarkdown
--- finished re-building ‘clusterRows.Rmd’

--- re-building ‘diagnostics.Rmd’ using rmarkdown

Quitting from diagnostics.Rmd:141-149 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'diagnostics.Rmd' failed with diagnostics:
Cannot create a graph object because the adjacency matrix contains NAs.
--- failed re-building ‘diagnostics.Rmd’

SUMMARY: processing the following file failed:
  ‘diagnostics.Rmd’

Error: Vignette re-building failed.
Execution halted