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This page was generated on 2025-04-07 12:51 -0400 (Mon, 07 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 116/217HostnameOS / ArchINSTALLBUILDCHECK
IHW 1.35.0  (landing page)
Nikos Ignatiadis
Snapshot Date: 2025-04-07 12:00 -0400 (Mon, 07 Apr 2025)
git_url: https://git.bioconductor.org/packages/IHW
git_branch: devel
git_last_commit: a1c2d79
git_last_commit_date: 2024-10-29 10:06:41 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped


BUILD results for IHW on teran2

To the developers/maintainers of the IHW package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: IHW
Version: 1.35.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data IHW
StartedAt: 2025-04-07 12:29:25 -0400 (Mon, 07 Apr 2025)
EndedAt: 2025-04-07 12:29:56 -0400 (Mon, 07 Apr 2025)
EllapsedTime: 30.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data IHW
###
##############################################################################
##############################################################################


* checking for file ‘IHW/DESCRIPTION’ ... OK
* preparing ‘IHW’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘introduction_to_ihw.Rmd’ using rmarkdown

Quitting from introduction_to_ihw.Rmd:41-47 [loadlibs]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `lazyLoadDBinsertVariable()`:
! write failed
---
Backtrace:
     ▆
  1. └─tools::buildVignettes(dir = ".", tangle = TRUE)
  2.   ├─base::tryCatch(...)
  3.   │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
  4.   │   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
  5.   │     └─base (local) doTryCatch(return(expr), name, parentenv, handler)
  6.   └─engine$weave(file, quiet = quiet, encoding = enc)
  7.     └─knitr:::vweave_rmarkdown(...)
  8.       └─rmarkdown::render(...)
  9.         └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
 10.           └─knitr:::process_file(text, output)
 11.             ├─xfun:::handle_error(...)
 12.             ├─base::withCallingHandlers(...)
 13.             └─knitr:::process_group(group)
 14.               └─knitr:::call_block(x)
 15.                 └─knitr:::block_exec(params)
 16.                   └─knitr:::eng_r(options)
 17.                     └─knitr:::block_cache(options, output, objs)
 18.                       └─cache$save(objects, outname, hash, lazy = options$cache.lazy)
 19.                         └─getFromNamespace("makeLazyLoadDB", "tools")(...)
 20.                           └─tools (local) lazyLoadDBinsertVariable(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'introduction_to_ihw.Rmd' failed with diagnostics:
write failed
--- failed re-building ‘introduction_to_ihw.Rmd’

SUMMARY: processing the following file failed:
  ‘introduction_to_ihw.Rmd’

Error: Vignette re-building failed.
Execution halted