Back to Multiple platform build/check report for BioC 3.21: simplified long |
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This page was generated on 2024-11-30 12:48 -0500 (Sat, 30 Nov 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" | 4748 |
palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" | 4461 |
lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4403 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 2207/2272 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
unifiedWMWqPCR 1.43.0 (landing page) Joris Meys
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the unifiedWMWqPCR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/unifiedWMWqPCR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: unifiedWMWqPCR |
Version: 1.43.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:unifiedWMWqPCR.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings unifiedWMWqPCR_1.43.0.tar.gz |
StartedAt: 2024-11-30 03:22:16 -0500 (Sat, 30 Nov 2024) |
EndedAt: 2024-11-30 03:26:29 -0500 (Sat, 30 Nov 2024) |
EllapsedTime: 253.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: unifiedWMWqPCR.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:unifiedWMWqPCR.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings unifiedWMWqPCR_1.43.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/unifiedWMWqPCR.Rcheck’ * using R Under development (unstable) (2024-11-20 r87352) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.6 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘unifiedWMWqPCR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘unifiedWMWqPCR’ version ‘1.43.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘unifiedWMWqPCR’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
unifiedWMWqPCR.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL unifiedWMWqPCR ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’ * installing *source* package ‘unifiedWMWqPCR’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘order’ from package ‘base’ in package ‘unifiedWMWqPCR’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (unifiedWMWqPCR)
unifiedWMWqPCR.Rcheck/unifiedWMWqPCR-Ex.timings
name | user | system | elapsed | |
NBdata | 0.031 | 0.006 | 0.036 | |
as.matrix.uwmwEstimate | 0.206 | 0.033 | 0.239 | |
as.matrix.uwmwRes | 0.200 | 0.021 | 0.222 | |
forestplot-methods | 0.293 | 0.024 | 0.319 | |
getEstimate-methods | 0.195 | 0.022 | 0.218 | |
plot | 0.214 | 0.013 | 0.228 | |
sort_uwmwRes | 0.201 | 0.010 | 0.354 | |
uWMW-methods | 0.416 | 0.036 | 0.454 | |
uwmw_Accessors | 0.202 | 0.017 | 0.219 | |
uwmw_Extract | 0.198 | 0.012 | 0.211 | |
volcanopar | 0 | 0 | 0 | |
volcanoplot-methods | 0.213 | 0.015 | 0.229 | |