Back to Build/check report for BioC 3.23:   simplified   long
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

This page was generated on 2025-10-23 11:30 -0400 (Thu, 23 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 3809
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2250/2355HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
traviz 1.15.1  (landing page)
Koen Van den Berge
Snapshot Date: 2025-10-22 15:48 -0400 (Wed, 22 Oct 2025)
git_url: https://git.bioconductor.org/packages/traviz
git_branch: devel
git_last_commit: 3aa81b6
git_last_commit_date: 2025-07-24 09:45:40 -0400 (Thu, 24 Jul 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for traviz on nebbiolo1

To the developers/maintainers of the traviz package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/traviz.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: traviz
Version: 1.15.1
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data traviz
StartedAt: 2025-10-23 00:51:53 -0000 (Thu, 23 Oct 2025)
EndedAt: 2025-10-23 00:51:54 -0000 (Thu, 23 Oct 2025)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data traviz
###
##############################################################################
##############################################################################


* checking for file ‘traviz/DESCRIPTION’ ... OK
* preparing ‘traviz’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
      -----------------------------------
* installing *source* package ‘traviz’ ...
** this is package ‘traviz’ version ‘1.15.1’
** using staged installation
** R
Error in .install_package_code_files(".", instdir) : 
files in '/tmp/RtmpdyFHfo/Rbuild1d5aa87bc02c9b/traviz/R' missing from 'Collate' field:
  zzz.R
ERROR: unable to collate and parse R files for package ‘traviz’
* removing ‘/tmp/RtmpdyFHfo/Rinst1d5aa85f1bf900/traviz’
      -----------------------------------
ERROR: package installation failed