Back to Multiple platform build/check report for BioC 3.21:   simplified   long
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2024-11-30 12:48 -0500 (Sat, 30 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4461
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4403
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1894/2272HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scTreeViz 1.13.0  (landing page)
Jayaram Kancherla
Snapshot Date: 2024-11-29 13:40 -0500 (Fri, 29 Nov 2024)
git_url: https://git.bioconductor.org/packages/scTreeViz
git_branch: devel
git_last_commit: 9eebcab
git_last_commit_date: 2024-10-29 11:04:51 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    ERROR    OK  


CHECK results for scTreeViz on lconway

To the developers/maintainers of the scTreeViz package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scTreeViz.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: scTreeViz
Version: 1.13.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:scTreeViz.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings scTreeViz_1.13.0.tar.gz
StartedAt: 2024-11-30 02:14:01 -0500 (Sat, 30 Nov 2024)
EndedAt: 2024-11-30 02:17:47 -0500 (Sat, 30 Nov 2024)
EllapsedTime: 226.9 seconds
RetCode: 1
Status:   ERROR  
CheckDir: scTreeViz.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:scTreeViz.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings scTreeViz_1.13.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.21-bioc/meat/scTreeViz.Rcheck’
* using R Under development (unstable) (2024-11-20 r87352)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘scTreeViz/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘scTreeViz’ version ‘1.13.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
  cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
 ERROR
Package suggested but not available: ‘msd16s’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/Users/biocbuild/bbs-3.21-bioc/meat/scTreeViz.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings