| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-01-15 11:35 -0500 (Thu, 15 Jan 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-12-22 r89219) -- "Unsuffered Consequences" | 4848 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4628 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1791/2343 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rigvf 1.3.3 (landing page) Michael Love
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
|
To the developers/maintainers of the rigvf package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rigvf.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: rigvf |
| Version: 1.3.3 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rigvf |
| StartedAt: 2026-01-14 19:46:19 -0500 (Wed, 14 Jan 2026) |
| EndedAt: 2026-01-14 19:46:36 -0500 (Wed, 14 Jan 2026) |
| EllapsedTime: 17.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data rigvf
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* checking for file ‘rigvf/DESCRIPTION’ ... OK
* preparing ‘rigvf’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘rigvf.Rmd’ using rmarkdown
Quitting from rigvf.Rmd:101-108 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `tidyr::unnest_wider()`:
ℹ In column: `elements`.
ℹ In row: 1.
Caused by error:
! Can't unnest elements with missing names.
ℹ Supply `names_sep` to generate automatic names.
---
Backtrace:
▆
1. └─tidyr::unnest_wider(dplyr::select(res, elements), elements)
2. └─tidyr:::col_to_wide(...)
3. ├─tidyr:::with_indexed_errors(...)
4. │ └─rlang::try_fetch(...)
5. │ └─base::withCallingHandlers(...)
6. └─purrr::map(...)
7. └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
8. ├─purrr:::with_indexed_errors(...)
9. │ └─base::withCallingHandlers(...)
10. ├─purrr:::call_with_cleanup(...)
11. └─tidyr (local) .f(.x[[i]], ...)
12. └─tidyr:::elt_to_wide(...)
13. └─tidyr:::stop_use_names_sep(error_call = error_call)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'rigvf.Rmd' failed with diagnostics:
ℹ In column: `elements`.
ℹ In row: 1.
Caused by error:
! Can't unnest elements with missing names.
ℹ Supply `names_sep` to generate automatic names.
--- failed re-building ‘rigvf.Rmd’
SUMMARY: processing the following file failed:
‘rigvf.Rmd’
Error: Vignette re-building failed.
Execution halted