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This page was generated on 2024-10-24 11:04 -0400 (Thu, 24 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 3656
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1609/2281HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
psygenet2r 1.37.1  (landing page)
Alba Gutierrez-Sacristan
Snapshot Date: 2024-10-23 19:16 -0400 (Wed, 23 Oct 2024)
git_url: https://git.bioconductor.org/packages/psygenet2r
git_branch: devel
git_last_commit: 20b9d14
git_last_commit_date: 2024-08-12 12:38:08 -0400 (Mon, 12 Aug 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for psygenet2r on nebbiolo1

To the developers/maintainers of the psygenet2r package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/psygenet2r.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: psygenet2r
Version: 1.37.1
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data psygenet2r
StartedAt: 2024-10-24 05:18:19 -0400 (Thu, 24 Oct 2024)
EndedAt: 2024-10-24 05:18:20 -0400 (Thu, 24 Oct 2024)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data psygenet2r
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* checking for file ‘psygenet2r/DESCRIPTION’ ... OK
* preparing ‘psygenet2r’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘BgeeDB’, ‘topGO’, ‘GO.db’ are not available for package ‘psygenet2r’
Perhaps try a variation of:
install.packages(c('BgeeDB', 'topGO', 'GO.db'))
* removing ‘/tmp/RtmprZT6c9/Rinst17b1056f381446/psygenet2r’
      -----------------------------------
ERROR: package installation failed