Multiple platform build/check report for BioC 3.21 - BUILD results for pareg on palomino7

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences"	4742
palomino7	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences"	4456
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for pareg on palomino7

To the developers/maintainers of the pareg package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pareg.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: pareg

Version: 1.11.0

Command: chmod a+r pareg -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data pareg

StartedAt: 2024-11-21 20:50:06 -0500 (Thu, 21 Nov 2024)

EndedAt: 2024-11-21 21:05:34 -0500 (Thu, 21 Nov 2024)

EllapsedTime: 927.8 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r pareg -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data pareg
###
##############################################################################
##############################################################################


* checking for file 'pareg/DESCRIPTION' ... OK
* preparing 'pareg':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'pareg.Rmd' using rmarkdown
Channels:
 - anaconda
Platform: win-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: C:\Users\biocbuild\.basilisk\1.19.0\pareg\1.11.0\pareg

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  bzip2              anaconda/win-64::bzip2-1.0.8-h2bbff1b_6 
  ca-certificates    anaconda/win-64::ca-certificates-2024.9.24-haa95532_0 
  libffi             anaconda/win-64::libffi-3.4.4-hd77b12b_1 
  openssl            anaconda/win-64::openssl-3.0.15-h827c3e9_0 
  pip                anaconda/win-64::pip-24.2-py310haa95532_0 
  python             anaconda/win-64::python-3.10.14-he1021f5_1 
  setuptools         anaconda/win-64::setuptools-75.1.0-py310haa95532_0 
  sqlite             anaconda/win-64::sqlite-3.45.3-h2bbff1b_0 
  tk                 anaconda/win-64::tk-8.6.14-h0416ee5_0 
  tzdata             anaconda/noarch::tzdata-2024b-h04d1e81_0 
  vc                 anaconda/win-64::vc-14.40-h2eaa2aa_1 
  vs2015_runtime     anaconda/win-64::vs2015_runtime-14.40.33807-h98bb1dd_1 
  wheel              anaconda/win-64::wheel-0.44.0-py310haa95532_0 
  xz                 anaconda/win-64::xz-5.4.6-h8cc25b3_1 
  zlib               anaconda/win-64::zlib-1.2.13-h8cc25b3_1 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - anaconda
Platform: win-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

# All requested packages already installed.

Channels:
 - anaconda
Platform: win-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed

LibMambaUnsatisfiableError: Encountered problems while solving:
  - package tensorflow-base-2.10.0-gpu_py37h9761872_0 requires python >=3.7,<3.8.0a0, but none of the providers can be installed

Could not solve for environment specs
The following packages are incompatible
\u251c\u2500 python 3.10.14**  is installable and it requires
\u2502  \u2514\u2500 openssl >=3.0.13,<4.0a0 , which can be installed;
\u2514\u2500 tensorflow 2.10.0**  is not installable because there are no viable options
   \u251c\u2500 tensorflow 2.10.0 would require
   \u2502  \u2514\u2500 tensorflow-base [2.10.0 eigen_py37he3c91d7_0|2.10.0 gpu_py37h9761872_0], which requires
   \u2502     \u2514\u2500 python >=3.7,<3.8.0a0 , which conflicts with any installable versions previously reported;
   \u251c\u2500 tensorflow 2.10.0 would require
   \u2502  \u2514\u2500 tensorflow-base [2.10.0 eigen_py310he3c91d7_0|2.10.0 gpu_py310h9761872_0|2.10.0 mkl_py310h6a7f48e_0], which requires
   \u2502     \u2514\u2500 openssl >=1.1.1s,<1.1.2a , which conflicts with any installable versions previously reported;
   \u251c\u2500 tensorflow 2.10.0 would require
   \u2502  \u2514\u2500 tensorflow-base [2.10.0 eigen_py38he3c91d7_0|2.10.0 gpu_py38h9761872_0|2.10.0 mkl_py38h6a7f48e_0], which requires
   \u2502     \u2514\u2500 python >=3.8,<3.9.0a0 , which conflicts with any installable versions previously reported;
   \u2514\u2500 tensorflow 2.10.0 would require
      \u2514\u2500 tensorflow-base [2.10.0 eigen_py39he3c91d7_0|2.10.0 gpu_py39h9761872_0|2.10.0 mkl_py39h6a7f48e_0], which requires
         \u2514\u2500 python >=3.9,<3.10.0a0 , which conflicts with any installable versions previously reported.


Quitting from lines 145-150 [unnamed-chunk-9] (pareg.Rmd)
Error: processing vignette 'pareg.Rmd' failed with diagnostics:
one or more Python packages failed to install [error code 1]
--- failed re-building 'pareg.Rmd'

--- re-building 'pathway_similarities.Rmd' using rmarkdown
--- finished re-building 'pathway_similarities.Rmd'

SUMMARY: processing the following file failed:
  'pareg.Rmd'

Error: Vignette re-building failed.
Execution halted