| Back to Build/check report for BioC 3.23: simplified long |
|
This page was generated on 2025-11-06 11:32 -0500 (Thu, 06 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4818 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1452/2323 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| notameStats 1.1.0 (landing page) Vilhelm Suksi
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
|
To the developers/maintainers of the notameStats package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/notameStats.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: notameStats |
| Version: 1.1.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:notameStats.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings notameStats_1.1.0.tar.gz |
| StartedAt: 2025-11-06 02:02:17 -0500 (Thu, 06 Nov 2025) |
| EndedAt: 2025-11-06 02:07:07 -0500 (Thu, 06 Nov 2025) |
| EllapsedTime: 290.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: notameStats.Rcheck |
| Warnings: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:notameStats.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings notameStats_1.1.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/notameStats.Rcheck’
* using R Under development (unstable) (2025-10-20 r88955)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘notameStats/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘notameStats’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘notameStats’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License stub is invalid DCF.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
perform_auc 15.738 2.616 4.985
pls_da 17.793 0.348 18.143
muvr_analysis 14.458 1.037 15.504
perform_logistic 11.013 2.357 1.742
perform_non_parametric 7.759 4.182 3.821
perform_lmer 8.882 1.540 4.753
pls 7.567 0.692 8.184
perform_correlation_tests 4.667 2.644 3.098
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
INFO [2025-11-06 02:06:52] Paired tests performed.
INFO [2025-11-06 02:06:53] Starting tests for A & B
INFO [2025-11-06 02:06:53] Tests performed
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 87 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_stats.R:654:3'): Simple tests work in cases where alternative levels for confidence intervals are returned in case 95% confidence interval can't be computed ──
any(grepl(c("UCI0"), colnames(res))) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 87 ]
Error: Test failures
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR, 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/notameStats.Rcheck/00check.log’
for details.
notameStats.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL notameStats ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘notameStats’ ... ** this is package ‘notameStats’ version ‘1.1.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (notameStats)
notameStats.Rcheck/tests/testthat.Rout.fail
R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(notameStats)
Loading required package: SummarizedExperiment
Loading required package: MatrixGenerics
Loading required package: matrixStats
Attaching package: 'MatrixGenerics'
The following objects are masked from 'package:matrixStats':
colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse,
colCounts, colCummaxs, colCummins, colCumprods, colCumsums,
colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs,
colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats,
colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds,
colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads,
colWeightedMeans, colWeightedMedians, colWeightedSds,
colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet,
rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods,
rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps,
rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins,
rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks,
rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars,
rowWeightedMads, rowWeightedMeans, rowWeightedMedians,
rowWeightedSds, rowWeightedVars
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics
Loading required package: generics
Attaching package: 'generics'
The following objects are masked from 'package:base':
as.difftime, as.factor, as.ordered, intersect, is.element, setdiff,
setequal, union
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, is.unsorted, lapply,
mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
rank, rbind, rownames, sapply, saveRDS, table, tapply, unique,
unsplit, which.max, which.min
Loading required package: S4Vectors
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: IRanges
Loading required package: Seqinfo
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Attaching package: 'Biobase'
The following object is masked from 'package:MatrixGenerics':
rowMedians
The following objects are masked from 'package:matrixStats':
anyMissing, rowMedians
>
> test_check("notameStats")
Running tests in parallel requires the 3rd edition
INFO [2025-11-06 02:06:24] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-06 02:06:24] Cohen's D computed.
INFO [2025-11-06 02:06:24] Starting to compute Cohen's D between groups B & A
INFO [2025-11-06 02:06:24] Cohen's D computed.
INFO [2025-11-06 02:06:25] Starting to compute fold changes.
INFO [2025-11-06 02:06:25] Fold changes computed.
INFO [2025-11-06 02:06:25] Starting to compute fold changes.
INFO [2025-11-06 02:06:25] Fold changes computed.
INFO [2025-11-06 02:06:25] Starting linear regression.
INFO [2025-11-06 02:06:27] Linear regression performed.
INFO [2025-11-06 02:06:27] Starting linear regression.
INFO [2025-11-06 02:06:28] Linear regression performed.
INFO [2025-11-06 02:06:28]
92% of features flagged for low quality
INFO [2025-11-06 02:06:28] Starting linear regression.
INFO [2025-11-06 02:06:29] Linear regression performed.
INFO [2025-11-06 02:06:30] Starting logistic regression
INFO [2025-11-06 02:06:31] Logistic regression performed.
INFO [2025-11-06 02:06:31] Starting logistic regression
INFO [2025-11-06 02:06:32] Logistic regression performed.
INFO [2025-11-06 02:06:33] Starting to compute Cohen's D between groups B & A
INFO [2025-11-06 02:06:33] Cohen's D computed.
INFO [2025-11-06 02:06:33] Starting to compute Cohen's D between groups C & A
INFO [2025-11-06 02:06:33] Cohen's D computed.
INFO [2025-11-06 02:06:33] Starting to compute Cohen's D between groups C & B
INFO [2025-11-06 02:06:33] Cohen's D computed.
INFO [2025-11-06 02:06:34] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-06 02:06:34] Cohen's D computed.
INFO [2025-11-06 02:06:34] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-06 02:06:34] Cohen's D computed.
INFO [2025-11-06 02:06:34] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-06 02:06:34] Cohen's D computed.
INFO [2025-11-06 02:06:35] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-06 02:06:35] Cohen's D computed.
INFO [2025-11-06 02:06:35] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-11-06 02:06:35] Cohen's D computed.
INFO [2025-11-06 02:06:35] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-11-06 02:06:35] Cohen's D computed.
INFO [2025-11-06 02:06:35] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-06 02:06:35] Cohen's D computed.
INFO [2025-11-06 02:06:35] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-11-06 02:06:36] Cohen's D computed.
INFO [2025-11-06 02:06:36] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-11-06 02:06:36] Cohen's D computed.
INFO [2025-11-06 02:06:36] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-06 02:06:36] Cohen's D computed.
INFO [2025-11-06 02:06:36] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-06 02:06:36] Cohen's D computed.
INFO [2025-11-06 02:06:36] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-06 02:06:37] Cohen's D computed.
INFO [2025-11-06 02:06:37] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-06 02:06:37] Cohen's D computed.
INFO [2025-11-06 02:06:37] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-11-06 02:06:37] Cohen's D computed.
INFO [2025-11-06 02:06:37] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-11-06 02:06:37] Cohen's D computed.
INFO [2025-11-06 02:06:37] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-06 02:06:37] Cohen's D computed.
INFO [2025-11-06 02:06:37] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-11-06 02:06:38] Cohen's D computed.
INFO [2025-11-06 02:06:38] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-11-06 02:06:38] Cohen's D computed.
INFO [2025-11-06 02:06:38] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-06 02:06:38] Cohen's D computed.
INFO [2025-11-06 02:06:38] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-06 02:06:38] Cohen's D computed.
INFO [2025-11-06 02:06:38] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-06 02:06:38] Cohen's D computed.
INFO [2025-11-06 02:06:39] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-06 02:06:39] Cohen's D computed.
INFO [2025-11-06 02:06:39] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-06 02:06:39] Cohen's D computed.
INFO [2025-11-06 02:06:39] Starting to compute Cohen's D between groups B & A from time change 2 - 1
INFO [2025-11-06 02:06:39] Cohen's D computed.
INFO [2025-11-06 02:06:39] Starting to compute Cohen's D between groups B & A from time change 3 - 1
INFO [2025-11-06 02:06:39] Cohen's D computed.
INFO [2025-11-06 02:06:39] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-06 02:06:40] Cohen's D computed.
INFO [2025-11-06 02:06:40] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-06 02:06:40] Cohen's D computed.
INFO [2025-11-06 02:06:40] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-06 02:06:40] Cohen's D computed.
INFO [2025-11-06 02:06:40] Starting to compute Cohen's D between groups B & A from time change 3 - 2
INFO [2025-11-06 02:06:40] Cohen's D computed.
INFO [2025-11-06 02:06:40] Starting to compute Cohen's D between groups C & A from time change 2 - 1
INFO [2025-11-06 02:06:41] Cohen's D computed.
INFO [2025-11-06 02:06:41] Starting to compute Cohen's D between groups C & A from time change 3 - 1
INFO [2025-11-06 02:06:41] Cohen's D computed.
INFO [2025-11-06 02:06:41] Starting to compute Cohen's D between groups C & A from time change 3 - 2
INFO [2025-11-06 02:06:41] Cohen's D computed.
INFO [2025-11-06 02:06:41] Starting to compute Cohen's D between groups C & B from time change 2 - 1
INFO [2025-11-06 02:06:41] Cohen's D computed.
INFO [2025-11-06 02:06:41] Starting to compute Cohen's D between groups C & B from time change 3 - 1
INFO [2025-11-06 02:06:41] Cohen's D computed.
INFO [2025-11-06 02:06:41] Starting to compute Cohen's D between groups C & B from time change 3 - 2
INFO [2025-11-06 02:06:42] Cohen's D computed.
INFO [2025-11-06 02:06:42] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:42] Found 20 complete pairs.
INFO [2025-11-06 02:06:42] Paired tests performed.
INFO [2025-11-06 02:06:42] Starting tests for 1 & 2
INFO [2025-11-06 02:06:42] Tests performed
INFO [2025-11-06 02:06:42] Starting tests for 1 & 3
INFO [2025-11-06 02:06:43] Tests performed
INFO [2025-11-06 02:06:43] Starting tests for 2 & 3
INFO [2025-11-06 02:06:43] Tests performed
INFO [2025-11-06 02:06:43] Starting tests for 1 & 2
INFO [2025-11-06 02:06:43] Tests performed
INFO [2025-11-06 02:06:43] Starting tests for 1 & 3
INFO [2025-11-06 02:06:43] Tests performed
INFO [2025-11-06 02:06:43] Starting tests for 2 & 3
INFO [2025-11-06 02:06:44] Tests performed
INFO [2025-11-06 02:06:44] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:44] Found 4 complete pairs.
INFO [2025-11-06 02:06:44] Paired tests performed.
INFO [2025-11-06 02:06:44] Starting paired tests for 1 & 3
INFO [2025-11-06 02:06:44] Found 4 complete pairs.
INFO [2025-11-06 02:06:44] Paired tests performed.
INFO [2025-11-06 02:06:44] Starting paired tests for 2 & 3
INFO [2025-11-06 02:06:44] Found 4 complete pairs.
INFO [2025-11-06 02:06:44] Paired tests performed.
INFO [2025-11-06 02:06:45] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:45] Found 8 complete pairs.
INFO [2025-11-06 02:06:45] Paired tests performed.
INFO [2025-11-06 02:06:45] Starting paired tests for 1 & 3
INFO [2025-11-06 02:06:45] Found 8 complete pairs.
INFO [2025-11-06 02:06:45] Paired tests performed.
INFO [2025-11-06 02:06:45] Starting paired tests for 2 & 3
INFO [2025-11-06 02:06:45] Found 8 complete pairs.
INFO [2025-11-06 02:06:45] Paired tests performed.
INFO [2025-11-06 02:06:45] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:45] Found 4 complete pairs.
INFO [2025-11-06 02:06:45] Paired tests performed.
INFO [2025-11-06 02:06:46] Starting paired tests for 1 & 3
INFO [2025-11-06 02:06:46] Found 4 complete pairs.
INFO [2025-11-06 02:06:46] Paired tests performed.
INFO [2025-11-06 02:06:46] Starting paired tests for 2 & 3
INFO [2025-11-06 02:06:46] Found 4 complete pairs.
INFO [2025-11-06 02:06:46] Paired tests performed.
INFO [2025-11-06 02:06:46] Starting tests for A & B
INFO [2025-11-06 02:06:47] Tests performed
INFO [2025-11-06 02:06:48] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:48] Found 20 complete pairs.
INFO [2025-11-06 02:06:48] Paired tests performed.
INFO [2025-11-06 02:06:48] Starting tests for 1 & 2
INFO [2025-11-06 02:06:49] Tests performed
INFO [2025-11-06 02:06:49] Starting tests for 1 & 3
INFO [2025-11-06 02:06:49] Tests performed
INFO [2025-11-06 02:06:49] Starting tests for 2 & 3
INFO [2025-11-06 02:06:49] Tests performed
INFO [2025-11-06 02:06:49] Starting tests for 1 & 2
INFO [2025-11-06 02:06:50] Tests performed
INFO [2025-11-06 02:06:50] Starting tests for 1 & 3
INFO [2025-11-06 02:06:50] Tests performed
INFO [2025-11-06 02:06:50] Starting tests for 2 & 3
INFO [2025-11-06 02:06:50] Tests performed
INFO [2025-11-06 02:06:50] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:50] Found 4 complete pairs.
INFO [2025-11-06 02:06:50] Paired tests performed.
INFO [2025-11-06 02:06:51] Starting paired tests for 1 & 3
INFO [2025-11-06 02:06:51] Found 4 complete pairs.
INFO [2025-11-06 02:06:51] Paired tests performed.
INFO [2025-11-06 02:06:51] Starting paired tests for 2 & 3
INFO [2025-11-06 02:06:51] Found 4 complete pairs.
INFO [2025-11-06 02:06:51] Paired tests performed.
INFO [2025-11-06 02:06:51] Starting correlation tests.
INFO [2025-11-06 02:06:51] Performing correlation tests for single object
INFO [2025-11-06 02:06:51] Correlation tests performed.
INFO [2025-11-06 02:06:51] Starting correlation tests.
INFO [2025-11-06 02:06:51] Starting correlation tests.
INFO [2025-11-06 02:06:51] Starting correlation tests.
INFO [2025-11-06 02:06:51] Starting correlation tests.
INFO [2025-11-06 02:06:51] Performing correlation tests for two objects
INFO [2025-11-06 02:06:52] Correlation tests performed.
INFO [2025-11-06 02:06:52] Starting correlation tests.
INFO [2025-11-06 02:06:52] Performing correlation tests for two objects
INFO [2025-11-06 02:06:52] Correlation tests performed.
INFO [2025-11-06 02:06:52] Starting paired tests for 1 & 2
INFO [2025-11-06 02:06:52] Found 20 complete pairs.
INFO [2025-11-06 02:06:52] Paired tests performed.
INFO [2025-11-06 02:06:53] Starting tests for A & B
INFO [2025-11-06 02:06:53] Tests performed
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 87 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_stats.R:654:3'): Simple tests work in cases where alternative levels for confidence intervals are returned in case 95% confidence interval can't be computed ──
any(grepl(c("UCI0"), colnames(res))) is not TRUE
`actual`: FALSE
`expected`: TRUE
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 87 ]
Error: Test failures
Execution halted
notameStats.Rcheck/notameStats-Ex.timings
| name | user | system | elapsed | |
| cohens_d | 2.775 | 0.492 | 2.888 | |
| fit_rf | 0.182 | 0.020 | 0.203 | |
| fold_change | 0.320 | 0.492 | 0.353 | |
| importance_rf | 0.199 | 0.060 | 0.188 | |
| muvr_analysis | 14.458 | 1.037 | 15.504 | |
| perform_auc | 15.738 | 2.616 | 4.985 | |
| perform_correlation_tests | 4.667 | 2.644 | 3.098 | |
| perform_homoscedasticity_tests | 3.168 | 1.305 | 1.549 | |
| perform_kruskal_wallis | 1.873 | 0.925 | 0.719 | |
| perform_lm | 3.285 | 1.600 | 1.293 | |
| perform_lm_anova | 1.814 | 0.914 | 0.834 | |
| perform_lmer | 8.882 | 1.540 | 4.753 | |
| perform_logistic | 11.013 | 2.357 | 1.742 | |
| perform_non_parametric | 7.759 | 4.182 | 3.821 | |
| perform_oneway_anova | 1.700 | 0.827 | 0.657 | |
| perform_permanova | 1.731 | 0.306 | 1.508 | |
| perform_t_test | 1.343 | 1.990 | 1.701 | |
| pls | 7.567 | 0.692 | 8.184 | |
| pls_da | 17.793 | 0.348 | 18.143 | |
| summarize_results | 2.585 | 1.153 | 1.311 | |
| summary_statistics | 2.088 | 1.710 | 1.014 | |