Back to Multiple platform build/check report for BioC 3.21: simplified long |
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This page was generated on 2025-01-25 15:38 -0500 (Sat, 25 Jan 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 4658 |
palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" | 4455 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" | 4408 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1214/2286 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
metaseqR2 1.19.0 (landing page) Panagiotis Moulos
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | ||||||||||
To the developers/maintainers of the metaseqR2 package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metaseqR2.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: metaseqR2 |
Version: 1.19.0 |
Command: chmod a+r metaseqR2 -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data metaseqR2 |
StartedAt: 2025-01-24 20:23:16 -0500 (Fri, 24 Jan 2025) |
EndedAt: 2025-01-24 20:32:00 -0500 (Fri, 24 Jan 2025) |
EllapsedTime: 524.9 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r metaseqR2 -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data metaseqR2 ### ############################################################################## ############################################################################## * checking for file 'metaseqR2/DESCRIPTION' ... OK * preparing 'metaseqR2': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'metaseqr2-annotation.Rmd' using rmarkdown Quitting from lines 108-122 [example-1] (metaseqr2-annotation.Rmd) Error: processing vignette 'metaseqr2-annotation.Rmd' failed with diagnostics: HTTP 500 Internal Server Error. --- failed re-building 'metaseqr2-annotation.Rmd' --- re-building 'metaseqr2-statistics.Rmd' using rmarkdown Warning: call dbDisconnect() when finished working with a connection adding: biocbuild/bbs-3.21-bioc/tmpdir/Rtmpuww7ur/test1/plots/qc/correlation_correlogram.png (deflated 7%) adding: biocbuild/bbs-3.21-bioc/tmpdir/Rtmpuww7ur/test1/plots/qc/correlation_heatmap.png (deflated 22%) adding: biocbuild/bbs-3.21-bioc/tmpdir/Rtmpuww7ur/test1/plots/qc/correlation_pairs.png (deflated 3%) adding: biocbuild/bbs-3.21-bioc/tmpdir/Rtmpuww7ur/test1/plots/qc/filtered_genes.png (deflated 11%) adding: biocbuild/bbs-3.21-bioc/tmpdir/Rtmpuww7ur/test1/plots/qc/mds.png (deflated 49%) adding: 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