Charles Berry
| Snapshot Date: 2024-11-20 13:40 -0500 (Wed, 20 Nov 2024) |
| git_url: https://git.bioconductor.org/packages/geneRxCluster |
| git_branch: devel |
| git_last_commit: 9ad2c2b |
| git_last_commit_date: 2024-10-29 09:49:44 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2024-11-21 11:33 -0500 (Thu, 21 Nov 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" | 4742 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" | 4456 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 797/2270 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| geneRxCluster 1.43.0 (landing page) Charles Berry
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the geneRxCluster package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/geneRxCluster.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: geneRxCluster |
| Version: 1.43.0 |
| Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL geneRxCluster |
| StartedAt: 2024-11-20 15:07:09 -0500 (Wed, 20 Nov 2024) |
| EndedAt: 2024-11-20 15:07:18 -0500 (Wed, 20 Nov 2024) |
| EllapsedTime: 9.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL geneRxCluster
###
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* installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’
* installing *source* package ‘geneRxCluster’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
gcc -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I/usr/local/include -DSTRICT_R_HEADERS=1 -fpic -g -O2 -Wall -c cluster.c -o cluster.o
cluster.c: In function ‘cutptClean_new_elt’:
cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else]
80 | if (*pvj!=NOTAIL)
| ^
cluster.c: In function ‘gRxC_cluster’:
cluster.c:682:2: warning: ‘cutptFunRes’ may be used uninitialized [-Wmaybe-uninitialized]
682 | SET_VECTOR_ELT(final,2,cutptFunRes);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cluster.c:495:7: note: ‘cutptFunRes’ was declared here
495 | SEXP cutptFunRes;
| ^~~~~~~~~~~
gcc -shared -L/home/biocbuild/bbs-3.21-bioc/R/lib -L/usr/local/lib -o geneRxCluster.so cluster.o -L/home/biocbuild/bbs-3.21-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.21-bioc/R/site-library/00LOCK-geneRxCluster/00new/geneRxCluster/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (geneRxCluster)