| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-20 11:37 -0400 (Mon, 20 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 alpha (2026-04-05 r89794) | 4961 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4690 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4627 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 707/2404 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| escape 2.7.3 (landing page) Nick Borcherding
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
| See other builds for escape in R Universe. | ||||||||||||||
|
To the developers/maintainers of the escape package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/escape.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: escape |
| Version: 2.7.3 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data escape |
| StartedAt: 2026-04-16 23:30:05 -0000 (Thu, 16 Apr 2026) |
| EndedAt: 2026-04-16 23:31:15 -0000 (Thu, 16 Apr 2026) |
| EllapsedTime: 70.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data escape
###
##############################################################################
##############################################################################
* checking for file ‘escape/DESCRIPTION’ ... OK
* preparing ‘escape’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘escape.Rmd’ using rmarkdown
Quitting from escape.Rmd:334-338 [unnamed-chunk-21]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'escape.Rmd' failed with diagnostics:
Problem while setting up geom aesthetics.
ℹ Error occurred in the 2nd layer.
Caused by error in `use_defaults()`:
! unused argument (theme = list(<object>, <object>, <object>, <object>, <object>, <object>, <object>, 6, c(6, 6, 6, 6), NULL, <object>, <object>, <object>, NULL, <object>, NULL, <object>, <object>, <object>, <object>, NULL, <object>, NULL, <object>, NULL, <object>, <object>, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, 0.5, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, 0.75, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, <object>, NULL, NULL, NULL, NULL, NULL, NULL,
NULL, NULL, <object>, NULL, 2, NULL, NULL, <object>, 1.2, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, 0.2, NULL, <object>, NULL, <object>, NULL, "bottom", NULL, "horizontal", NULL, "center", NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, c(0, 0, 0, 0), <object>, 2, <object>, <object>, NULL, NULL, NULL, <object>, NULL, <object>, <object>, <object>, NULL, NULL, FALSE, NULL, NULL, <object>, <object>, "panel", <object>, <object>, "panel", <object>, "topleft", NULL, c(12, 12, 12, 12), <object>,
NULL, NULL, "on", "inside", <object>, NULL, NULL, NULL, <object>, <object>, NULL, 3, 3))
--- failed re-building ‘escape.Rmd’
SUMMARY: processing the following file failed:
‘escape.Rmd’
Error: Vignette re-building failed.
Execution halted