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This page was generated on 2024-11-26 11:41 -0500 (Tue, 26 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4459
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4350
kjohnson3macOS 13.6.5 Venturaarm64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4108
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 473/2272HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
customProDB 1.47.0  (landing page)
Xiaojing Wang
Snapshot Date: 2024-11-25 13:40 -0500 (Mon, 25 Nov 2024)
git_url: https://git.bioconductor.org/packages/customProDB
git_branch: devel
git_last_commit: 695c102
git_last_commit_date: 2024-10-29 09:46:25 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  NO, package depends on 'VariantAnnotation' which is only available as a source package that needs compilation
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    WARNINGS    OK  NO, package depends on 'Rsamtools' which is only available as a source package that needs compilation


BUILD results for customProDB on palomino7

To the developers/maintainers of the customProDB package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/customProDB.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: customProDB
Version: 1.47.0
Command: chmod a+r customProDB -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data customProDB
StartedAt: 2024-11-25 17:53:18 -0500 (Mon, 25 Nov 2024)
EndedAt: 2024-11-25 17:54:57 -0500 (Mon, 25 Nov 2024)
EllapsedTime: 99.0 seconds
RetCode: 0
Status:   OK  
PackageFile: customProDB_1.47.0.tar.gz
PackageFileSize: 541.3 KiB

Command output

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###
### Running command:
###
###   chmod a+r customProDB -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data customProDB
###
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* checking for file 'customProDB/DESCRIPTION' ... OK
* preparing 'customProDB':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    'customProDB/inst/extdata/refseq/cosmic.RData'
    'customProDB/inst/extdata/refseq/dbsnpinCoding.RData'
* building 'customProDB_1.47.0.tar.gz'