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This page was generated on 2025-11-01 11:33 -0400 (Sat, 01 Nov 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4774
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2045/2321HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SpatialExperiment 1.21.0  (landing page)
Dario Righelli
Snapshot Date: 2025-10-31 13:40 -0400 (Fri, 31 Oct 2025)
git_url: https://git.bioconductor.org/packages/SpatialExperiment
git_branch: devel
git_last_commit: 0414e3b
git_last_commit_date: 2025-10-29 11:00:55 -0400 (Wed, 29 Oct 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  NO, package depends on 'SingleCellExperiment' which is not available


BUILD results for SpatialExperiment on nebbiolo1

To the developers/maintainers of the SpatialExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpatialExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SpatialExperiment
Version: 1.21.0
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SpatialExperiment
StartedAt: 2025-10-31 20:21:02 -0400 (Fri, 31 Oct 2025)
EndedAt: 2025-10-31 20:22:03 -0400 (Fri, 31 Oct 2025)
EllapsedTime: 61.1 seconds
RetCode: 0
Status:   OK  
PackageFile: SpatialExperiment_1.21.0.tar.gz
PackageFileSize: 5.157 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SpatialExperiment
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* checking for file ‘SpatialExperiment/DESCRIPTION’ ... OK
* preparing ‘SpatialExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 4.1.0)
  WARNING: Added dependency on R >= 4.1.0 because package code uses the
  pipe |> or function shorthand \(...) syntax added in R 4.1.0.
  File(s) using such syntax:
    ‘SpatialImage-utils.R’ ‘Validity.R’ ‘imgData-methods.R’
* building ‘SpatialExperiment_1.21.0.tar.gz’