Back to Multiple platform build/check report for BioC 3.21:   simplified   long
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2024-11-30 12:48 -0500 (Sat, 30 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4461
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4403
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1960/2272HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SingleMoleculeFootprinting 2.1.0  (landing page)
Guido Barzaghi
Snapshot Date: 2024-11-29 13:40 -0500 (Fri, 29 Nov 2024)
git_url: https://git.bioconductor.org/packages/SingleMoleculeFootprinting
git_branch: devel
git_last_commit: 4352241
git_last_commit_date: 2024-10-29 11:00:56 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  NO, package depends on 'QuasR' which is only available as a source package that needs compilation


INSTALL results for SingleMoleculeFootprinting on lconway

To the developers/maintainers of the SingleMoleculeFootprinting package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleMoleculeFootprinting.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SingleMoleculeFootprinting
Version: 2.1.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL SingleMoleculeFootprinting
StartedAt: 2024-11-29 15:26:36 -0500 (Fri, 29 Nov 2024)
EndedAt: 2024-11-29 15:27:43 -0500 (Fri, 29 Nov 2024)
EllapsedTime: 67.0 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL SingleMoleculeFootprinting
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.5-x86_64/Resources/library’
* installing *source* package ‘SingleMoleculeFootprinting’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘Biostrings::setequal’ by ‘dplyr::setequal’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::intersect’ by ‘dplyr::intersect’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::union’ by ‘dplyr::union’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::combine’ by ‘dplyr::combine’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Biostrings::collapse’ by ‘dplyr::collapse’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::setdiff’ by ‘dplyr::setdiff’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::Position’ by ‘ggplot2::Position’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::boxplot’ by ‘graphics::boxplot’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Matrix::image’ by ‘graphics::image’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::between’ by ‘plyranges::between’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n_distinct’ by ‘plyranges::n_distinct’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n’ by ‘plyranges::n’ when loading ‘SingleMoleculeFootprinting’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘Biostrings::setequal’ by ‘dplyr::setequal’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::intersect’ by ‘dplyr::intersect’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::union’ by ‘dplyr::union’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::combine’ by ‘dplyr::combine’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Biostrings::collapse’ by ‘dplyr::collapse’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::setdiff’ by ‘dplyr::setdiff’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::Position’ by ‘ggplot2::Position’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::boxplot’ by ‘graphics::boxplot’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Matrix::image’ by ‘graphics::image’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::between’ by ‘plyranges::between’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n_distinct’ by ‘plyranges::n_distinct’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n’ by ‘plyranges::n’ when loading ‘SingleMoleculeFootprinting’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘Biostrings::setequal’ by ‘dplyr::setequal’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::intersect’ by ‘dplyr::intersect’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::union’ by ‘dplyr::union’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::combine’ by ‘dplyr::combine’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Biostrings::collapse’ by ‘dplyr::collapse’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘GenomicRanges::setdiff’ by ‘dplyr::setdiff’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::Position’ by ‘ggplot2::Position’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘BiocGenerics::boxplot’ by ‘graphics::boxplot’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘Matrix::image’ by ‘graphics::image’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::between’ by ‘plyranges::between’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n_distinct’ by ‘plyranges::n_distinct’ when loading ‘SingleMoleculeFootprinting’
Warning: replacing previous import ‘dplyr::n’ by ‘plyranges::n’ when loading ‘SingleMoleculeFootprinting’
** testing if installed package keeps a record of temporary installation path
* DONE (SingleMoleculeFootprinting)