Back to Multiple platform build/check report for BioC 3.22:   simplified   long
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This page was generated on 2025-08-09 12:06 -0400 (Sat, 09 Aug 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 4818
palomino8Windows Server 2022 Datacenterx644.5.1 (2025-06-13 ucrt) -- "Great Square Root" 4553
lconwaymacOS 12.7.1 Montereyx86_644.5.1 (2025-06-13) -- "Great Square Root" 4595
kjohnson3macOS 13.7.1 Venturaarm644.5.1 Patched (2025-06-14 r88325) -- "Great Square Root" 4537
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2120/2317HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SVP 1.1.0  (landing page)
Shuangbin Xu
Snapshot Date: 2025-08-08 13:45 -0400 (Fri, 08 Aug 2025)
git_url: https://git.bioconductor.org/packages/SVP
git_branch: devel
git_last_commit: a9a165a
git_last_commit_date: 2025-04-15 13:49:09 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published


CHECK results for SVP on nebbiolo2

To the developers/maintainers of the SVP package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SVP.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SVP
Version: 1.1.0
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:SVP.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings SVP_1.1.0.tar.gz
StartedAt: 2025-08-09 03:21:20 -0400 (Sat, 09 Aug 2025)
EndedAt: 2025-08-09 03:27:26 -0400 (Sat, 09 Aug 2025)
EllapsedTime: 365.6 seconds
RetCode: 0
Status:   OK  
CheckDir: SVP.Rcheck
Warnings: 0

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:SVP.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings SVP_1.1.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/SVP.Rcheck’
* using R version 4.5.1 (2025-06-13)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.2 LTS
* using session charset: UTF-8
* checking for file ‘SVP/DESCRIPTION’ ... OK
* this is package ‘SVP’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Imports includes 22 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable.  Move as many as possible to Suggests and
use conditionally.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SVP’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
  installed size is 25.9Mb
  sub-directories of 1Mb or more:
    R      1.3Mb
    data   1.6Mb
    libs  22.7Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  LISAResult.Rd: SingleCellExperiment-class
  LISAsce-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class
  SVPExperiment.Rd: SingleCellExperiment, SingleCellExperiment-class
  cal_lisa_f1-method.Rd: SingleCellExperiment-class
  cluster.assign-method.Rd: SingleCellExperiment-class
  data_hpda_spe_cell_dec.Rd: SpatialExperiment-class
  data_sceSubPbmc.Rd: SingleCellExperiment-class
  extract_weight_adj-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class
  fscoreDfs.Rd: SingleCellExperiment-class, DataFrame-class, List-class
  gsvaExps.Rd: SingleCellExperiment-class, colData, List-class,
    assay<-, Annotated-class, metadata, Vector-class, mcols
  mob_sce.Rd: SingleCellExperiment-class
  pred.cell.signature-method.Rd: SingleCellExperiment-class
  runCORR-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class
  runDetectSVG-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class, SimpleList-class, DataFrame-class
  runENCODE-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class
  runGLOBALBV-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class
  runKldSVG-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class, SimpleList-class, DataFrame-class
  runLISA-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class, SimpleList-class
  runLOCALBV-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class, SimpleList-class
  runMCA-method.Rd: SingleCellExperiment-class
  runSGSA-method.Rd: SingleCellExperiment-class
  runWKDE-method.Rd: SingleCellExperiment-class,
    SpatialExperiment-class
  svDfs.Rd: SingleCellExperiment-class, DataFrame-class, List-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... INFO
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                   user system elapsed
runKldSVG-method 17.620  0.322   1.282
runSGSA-method   13.014  0.433  12.617
runWKDE-method    6.931  0.159   2.371
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.22-bioc/meat/SVP.Rcheck/00check.log’
for details.


Installation output

SVP.Rcheck/00install.out

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL SVP
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’
* installing *source* package ‘SVP’ ...
** this is package ‘SVP’ version ‘1.1.0’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c autocorutils.cpp -o autocorutils.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c bisp.cpp -o bisp.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c cor.cpp -o cor.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c extract.cpp -o extract.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c gearysc.cpp -o gearysc.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c getisord.cpp -o getisord.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c kld.cpp -o kld.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c lisa.cpp -o lisa.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c mca.cpp -o mca.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c metric.cpp -o metric.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c moransi.cpp -o moransi.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c pairknn.cpp -o pairknn.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppParallel/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppEigen/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/dqrng/include' -I/usr/local/include   -fopenmp -DARMA_64BIT_WORD -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic  -g -O2  -Wall -Werror=format-security  -c rwr.cpp -o rwr.o
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o SVP.so RcppExports.o autocorutils.o bisp.o cor.o extract.o gearysc.o getisord.o kld.o lisa.o mca.o metric.o moransi.o pairknn.o rwr.o -fopenmp -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-SVP/00new/SVP/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SVP)

Tests output

SVP.Rcheck/tests/testthat.Rout


R version 4.5.1 (2025-06-13) -- "Great Square Root"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(SVP)
> 
> test_check("SVP")
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|----|----|----|----|----|----|----|----|----|----|
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elapsed time is 0.028000 seconds 
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|----|----|----|----|----|----|----|----|----|----|
***************************************************
elapsed time is 0.023000 seconds 
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|----|----|----|----|----|----|----|----|----|----|
***************************************************
elapsed time is 0.022000 seconds 
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|----|----|----|----|----|----|----|----|----|----|
***************************************************
elapsed time is 1.368000 seconds 
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|----|----|----|----|----|----|----|----|----|----|
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|----|----|----|----|----|----|----|----|----|----|
***************************************************
0%   10   20   30   40   50   60   70   80   90   100%
|----|----|----|----|----|----|----|----|----|----|
***************************************************
The result is added to the input object, which can be extracted using
`LISAResult()` with `type='localG.SVP'`, and a specified `features`.
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 43 ]
> 
> proc.time()
   user  system elapsed 
 42.614   0.965  13.443 

Example timings

SVP.Rcheck/SVP-Ex.timings

nameusersystemelapsed
CellCycle.Hs0.0010.0000.002
LISAResult0.4620.0100.461
LISAsce-method0.7390.1190.837
SVP-accessors3.1480.0333.181
SVPExperiment0.3630.0150.377
as_tbl_df2.7110.0472.748
cal_lisa_f1-method0.2770.0320.131
cluster.assign-method0.3050.0070.312
data_CancerSEA0.0060.0000.006
data_SenMayo0.0000.0010.001
data_hpda_spe_cell_dec0.0130.0010.013
data_sceSubPbmc0.1620.0060.168
extract_weight_adj-method0.1540.0060.160
fast_cor0.0020.0020.002
fscoreDfs1.1550.0141.169
gsvaExps0.8240.0130.837
mob_marker_genes0.0010.0000.001
mob_sce0.3440.0160.360
plot_heatmap_globalbv2.8940.0812.017
pred.cell.signature-method3.8530.1924.048
runCORR-method0.1030.0040.089
runDetectMarker-method0.9960.0250.976
runDetectSVG-method0.7600.0250.714
runENCODE-method0.8500.0180.869
runGLOBALBV-method0.8030.0510.307
runKldSVG-method17.620 0.322 1.282
runLISA-method2.8950.0782.924
runLOCALBV-method0.8250.0120.837
runMCA-method0.8710.0290.894
runSGSA-method13.014 0.43312.617
runWKDE-method6.9310.1592.371
svDfs0.4490.0050.454