Diana Low
| Snapshot Date: 2025-02-25 13:40 -0500 (Tue, 25 Feb 2025) |
| git_url: https://git.bioconductor.org/packages/SPLINTER |
| git_branch: devel |
| git_last_commit: 15c4210 |
| git_last_commit_date: 2024-10-29 10:14:24 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-02-26 11:48 -0500 (Wed, 26 Feb 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4663 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" | 4493 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2025-01-22 r87618) -- "Unsuffered Consequences" | 4504 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 4458 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4313 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2053/2302 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SPLINTER 1.33.0 (landing page) Diana Low
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | ERROR | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the SPLINTER package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SPLINTER.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: SPLINTER |
| Version: 1.33.0 |
| Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data SPLINTER |
| StartedAt: 2025-02-26 03:06:07 -0000 (Wed, 26 Feb 2025) |
| EndedAt: 2025-02-26 03:06:08 -0000 (Wed, 26 Feb 2025) |
| EllapsedTime: 1.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data SPLINTER
###
##############################################################################
##############################################################################
* checking for file ‘SPLINTER/DESCRIPTION’ ... OK
* preparing ‘SPLINTER’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
-----------------------------------
ERROR: dependency ‘BSgenome.Mmusculus.UCSC.mm9’ is not available for package ‘SPLINTER’
Perhaps try a variation of:
install.packages('BSgenome.Mmusculus.UCSC.mm9')
* removing ‘/home/biocbuild/tmp/Rtmpawx2PH/Rinstb46057b9b8aec/SPLINTER’
-----------------------------------
ERROR: package installation failed