Mike Smith
| Snapshot Date: 2025-01-24 13:40 -0500 (Fri, 24 Jan 2025) |
| git_url: https://git.bioconductor.org/packages/Rhdf5lib |
| git_branch: devel |
| git_last_commit: d7c4f89 |
| git_last_commit_date: 2024-10-29 10:20:14 -0500 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-01-25 15:38 -0500 (Sat, 25 Jan 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 4658 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" | 4455 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" | 4408 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1740/2286 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Rhdf5lib 1.29.0 (landing page) Mike Smith
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | WARNINGS | ||||||||||
|
To the developers/maintainers of the Rhdf5lib package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rhdf5lib.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: Rhdf5lib |
| Version: 1.29.0 |
| Command: E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL Rhdf5lib |
| StartedAt: 2025-01-24 15:28:28 -0500 (Fri, 24 Jan 2025) |
| EndedAt: 2025-01-24 15:29:11 -0500 (Fri, 24 Jan 2025) |
| EllapsedTime: 43.0 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL Rhdf5lib ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library' * installing *source* package 'Rhdf5lib' ... ** this is package 'Rhdf5lib' version '1.29.0' ** using staged installation untarring hdf5_headers_1.10.7.tar.gz ... ** libs using C compiler: 'gcc.exe (GCC) 13.3.0' mkdir -p "E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt" "E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" "E:/biocbuild/bbs-3.21-bioc/R/bin/x64/Rscript.exe" "../tools/copy_hdf5_files.R" "E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt" "E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" Copying libraries Copying headers Done "E:/biocbuild/bbs-3.21-bioc/R/bin/x64/Rscript.exe" "../tools/winlibs.R" "E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt" Copying libcurl etc gcc -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -I"E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Rhdf5lib.c -o Rhdf5lib.o gcc -shared -s -static-libgcc -o Rhdf5lib.dll tmp.def Rhdf5lib.o E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt/libhdf5.a E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt/libsz.a E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64-ucrt/libaec.a -lpsapi -lz -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR installing to E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rhdf5lib)