Back to Multiple platform build/check report for BioC 3.21:   simplified   long
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2025-01-25 15:38 -0500 (Sat, 25 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 4658
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2025-01-21 r87610 ucrt) -- "Unsuffered Consequences" 4455
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" 4408
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1718/2286HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RepViz 1.23.0  (landing page)
Thomas Faux, Asta Laiho
Snapshot Date: 2025-01-24 13:40 -0500 (Fri, 24 Jan 2025)
git_url: https://git.bioconductor.org/packages/RepViz
git_branch: devel
git_last_commit: 76973d5
git_last_commit_date: 2024-10-29 10:36:39 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped


BUILD results for RepViz on palomino7

To the developers/maintainers of the RepViz package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RepViz.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: RepViz
Version: 1.23.0
Command: chmod a+r RepViz -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data RepViz
StartedAt: 2025-01-24 21:41:40 -0500 (Fri, 24 Jan 2025)
EndedAt: 2025-01-24 21:42:20 -0500 (Fri, 24 Jan 2025)
EllapsedTime: 40.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r RepViz -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data RepViz
###
##############################################################################
##############################################################################


* checking for file 'RepViz/DESCRIPTION' ... OK
* preparing 'RepViz':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'RepViz.Rmd' using rmarkdown

Quitting from lines 81-93 [plot_plot] (RepViz.Rmd)
Error: processing vignette 'RepViz.Rmd' failed with diagnostics:
Failed to parse URL: Bad scheme
--- failed re-building 'RepViz.Rmd'

SUMMARY: processing the following file failed:
  'RepViz.Rmd'

Error: Vignette re-building failed.
Execution halted