Hugo Gruson
| Snapshot Date: 2026-03-12 13:40 -0400 (Thu, 12 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/Rarr |
| git_branch: devel |
| git_last_commit: d9f9b5a |
| git_last_commit_date: 2026-03-11 18:55:46 -0400 (Wed, 11 Mar 2026) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-13 11:34 -0400 (Fri, 13 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4819 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 4049 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1715/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Rarr 1.11.30 (landing page) Hugo Gruson
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| See other builds for Rarr in R Universe. | ||||||||||||||
|
To the developers/maintainers of the Rarr package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rarr.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: Rarr |
| Version: 1.11.30 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Rarr |
| StartedAt: 2026-03-12 15:06:27 -0400 (Thu, 12 Mar 2026) |
| EndedAt: 2026-03-12 15:06:29 -0400 (Thu, 12 Mar 2026) |
| EllapsedTime: 2.6 seconds |
| RetCode: 1 |
| Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Rarr ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘Rarr’ ... ** this is package ‘Rarr’ version ‘1.11.30’ ** using staged installation NO_RLIB= R_CPPFLAGS=-I/Library/Frameworks/R.framework/Resources/include configure: is Bioc build machine configure: configuring the Zstd filter... configure: compiling bundled Zstd library configure: configuring the BLOSC filter... configure: compiling bundled BLOSC library checking whether C compiler accepts -msse2... no configure: Bioc build machine; disabling MAVX2 configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/compression_tools/blosc/lib/blosc-1.21.6/Makefile config.status: creating src/compression_tools/blosc/Makefile config.status: creating src/compression_tools/blosc/lib/snappy-1.2.2/Makefile ** libs using C compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’ using SDK: ‘MacOSX14.4.sdk’ clang -arch arm64 -std=gnu23 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -I/opt/R/arm64/include -falign-functions=64 -Wall -g -O2 -fPIC -falign-functions=64 -Wall -g -O2 -c Rarr.c -o Rarr.o error: invalid value 'gnu23' in '-std=gnu23' note: use 'c89', 'c90', or 'iso9899:1990' for 'ISO C 1990' standard note: use 'iso9899:199409' for 'ISO C 1990 with amendment 1' standard note: use 'gnu89' or 'gnu90' for 'ISO C 1990 with GNU extensions' standard note: use 'c99' or 'iso9899:1999' for 'ISO C 1999' standard note: use 'gnu99' for 'ISO C 1999 with GNU extensions' standard note: use 'c11' or 'iso9899:2011' for 'ISO C 2011' standard note: use 'gnu11' for 'ISO C 2011 with GNU extensions' standard note: use 'c17', 'iso9899:2017', 'c18', or 'iso9899:2018' for 'ISO C 2017' standard note: use 'gnu17' or 'gnu18' for 'ISO C 2017 with GNU extensions' standard note: use 'c2x' for 'Working Draft for ISO C2x' standard note: use 'gnu2x' for 'Working Draft for ISO C2x with GNU extensions' standard make: *** [Rarr.o] Error 1 ERROR: compilation failed for package ‘Rarr’ * removing ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rarr’