| Back to Build/check report for BioC 3.23: simplified long |
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This page was generated on 2025-11-01 11:32 -0400 (Sat, 01 Nov 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" | 4774 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1729/2321 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| REDseq 1.57.0 (landing page) Lihua Julie Zhu
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
|
To the developers/maintainers of the REDseq package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/REDseq.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: REDseq |
| Version: 1.57.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data REDseq |
| StartedAt: 2025-10-31 19:42:56 -0400 (Fri, 31 Oct 2025) |
| EndedAt: 2025-10-31 19:43:08 -0400 (Fri, 31 Oct 2025) |
| EllapsedTime: 12.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data REDseq
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* checking for file ‘REDseq/DESCRIPTION’ ... OK
* preparing ‘REDseq’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
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* installing *source* package ‘REDseq’ ...
** this is package ‘REDseq’ version ‘1.57.0’
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘ChIPpeakAnno’:
object ‘microRNAs’ is not exported by 'namespace:GenomicFeatures'
Execution halted
ERROR: lazy loading failed for package ‘REDseq’
* removing ‘/tmp/RtmpQI9nOs/Rinst119b583624dbdb/REDseq’
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ERROR: package installation failed