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This page was generated on 2024-12-24 11:47 -0500 (Tue, 24 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4754
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4472
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4426
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4381
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" 4373
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1352/2274HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSstatsShiny 1.9.0  (landing page)
Devon Kohler
Snapshot Date: 2024-12-23 13:40 -0500 (Mon, 23 Dec 2024)
git_url: https://git.bioconductor.org/packages/MSstatsShiny
git_branch: devel
git_last_commit: 41427c3
git_last_commit_date: 2024-10-29 11:16:23 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    WARNINGS  


CHECK results for MSstatsShiny on kunpeng2

To the developers/maintainers of the MSstatsShiny package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MSstatsShiny.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: MSstatsShiny
Version: 1.9.0
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:MSstatsShiny.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings MSstatsShiny_1.9.0.tar.gz
StartedAt: 2024-12-24 09:04:38 -0000 (Tue, 24 Dec 2024)
EndedAt: 2024-12-24 09:09:04 -0000 (Tue, 24 Dec 2024)
EllapsedTime: 265.3 seconds
RetCode: 0
Status:   WARNINGS  
CheckDir: MSstatsShiny.Rcheck
Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD check --install=check:MSstatsShiny.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings MSstatsShiny_1.9.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/MSstatsShiny.Rcheck’
* using R Under development (unstable) (2024-11-24 r87369)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘MSstatsShiny/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MSstatsShiny’ version ‘1.9.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Imports includes 22 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable.  Move as many as possible to Suggests and
use conditionally.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MSstatsShiny’ can be installed ... WARNING
Found the following significant warnings:
  Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
  Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
See ‘/home/biocbuild/bbs-3.21-bioc/meat/MSstatsShiny.Rcheck/00install.out’ for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... NOTE
Unexported objects imported by ':::' calls:
  ‘shinyBS:::buildTooltipOrPopoverOptionsList’ ‘shinyBS:::shinyBSDep’
  See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
getAnnot: no visible binding for global variable ‘annotation.pd’
getSummary1: no visible binding for global variable ‘Condition’
getSummary1: no visible binding for global variable ‘BioReplicate’
getSummary1: no visible binding for global variable ‘Mixture’
getSummary1: no visible binding for global variable ‘Run’
getSummary1: no visible binding for global variable ‘TechRepMixture’
getSummary1: no visible binding for global variable ‘Fraction’
getSummary1: no visible binding for global variable ‘Condition_Run’
getSummary1: no visible binding for global variable ‘BioReplicate_Run’
getSummary1: no visible binding for global variable ‘Number of
  Fractions’
getSummary2: no visible binding for global variable ‘ProteinName’
getSummary2: no visible binding for global variable ‘PeptideSequence’
getSummary2: no visible binding for global variable ‘Charge’
getSummary2: no visible binding for global variable ‘PrecursorCharge’
getSummary2: no visible binding for global variable ‘FragmentIon’
getSummary2: no visible binding for global variable ‘ProductCharge’
getSummary2: no visible binding for global variable ‘FEATURES’
getSummary2: no visible binding for global variable ‘Intensity’
getSummary2: no visible binding for global variable ‘Min_Intensity’
getSummary2: no visible binding for global variable ‘Max_Intensity’
getSummary2: no visible binding for global variable ‘npep’
getSummary2: no visible binding for global variable ‘nfea’
getSummary2: no visible binding for global variable
  ‘Features_Peptides_min’
getSummary2: no visible binding for global variable
  ‘Features_Peptides_max’
getSummary2: no visible binding for global variable
  ‘Peptides_Proteins_min’
getSummary2: no visible binding for global variable
  ‘Peptides_Proteins_max’
loadpageServer: no visible global function definition for
  ‘moduleServer’
server: no visible global function definition for ‘callModule’
statmodelServer: no visible global function definition for
  ‘updateNumericInput’
Undefined global functions or variables:
  BioReplicate BioReplicate_Run Charge Condition Condition_Run FEATURES
  Features_Peptides_max Features_Peptides_min Fraction FragmentIon
  Intensity Max_Intensity Min_Intensity Mixture Number of Fractions
  PeptideSequence Peptides_Proteins_max Peptides_Proteins_min
  PrecursorCharge ProductCharge ProteinName Run TechRepMixture
  annotation.pd callModule moduleServer nfea npep updateNumericInput
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
tmt_model              8.339  0.039   8.241
apply_adj              7.118  0.223   7.357
tmt_summarization_loop 7.165  0.044   7.093
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.21-bioc/meat/MSstatsShiny.Rcheck/00check.log’
for details.


Installation output

MSstatsShiny.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL MSstatsShiny
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library’
* installing *source* package ‘MSstatsShiny’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
** testing if installed package keeps a record of temporary installation path
* DONE (MSstatsShiny)

Tests output

MSstatsShiny.Rcheck/tests/testthat.Rout


R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(mockery)
> library(MSstatsShiny)
Warning messages:
1: replacing previous import 'MSstats::DIAUmpiretoMSstatsFormat' by 'MSstatsConvert::DIAUmpiretoMSstatsFormat' when loading 'MSstatsShiny' 
2: replacing previous import 'MSstats::ProgenesistoMSstatsFormat' by 'MSstatsConvert::ProgenesistoMSstatsFormat' when loading 'MSstatsShiny' 
3: replacing previous import 'MSstats::OpenMStoMSstatsFormat' by 'MSstatsConvert::OpenMStoMSstatsFormat' when loading 'MSstatsShiny' 
4: replacing previous import 'MSstats::OpenSWATHtoMSstatsFormat' by 'MSstatsConvert::OpenSWATHtoMSstatsFormat' when loading 'MSstatsShiny' 
5: replacing previous import 'MSstats::FragPipetoMSstatsFormat' by 'MSstatsConvert::FragPipetoMSstatsFormat' when loading 'MSstatsShiny' 
6: replacing previous import 'MSstats::SpectronauttoMSstatsFormat' by 'MSstatsConvert::SpectronauttoMSstatsFormat' when loading 'MSstatsShiny' 
7: replacing previous import 'MSstats::MaxQtoMSstatsFormat' by 'MSstatsConvert::MaxQtoMSstatsFormat' when loading 'MSstatsShiny' 
8: replacing previous import 'MSstats::DIANNtoMSstatsFormat' by 'MSstatsConvert::DIANNtoMSstatsFormat' when loading 'MSstatsShiny' 
9: replacing previous import 'MSstats::SkylinetoMSstatsFormat' by 'MSstatsConvert::SkylinetoMSstatsFormat' when loading 'MSstatsShiny' 
10: replacing previous import 'MSstats::PDtoMSstatsFormat' by 'MSstatsConvert::PDtoMSstatsFormat' when loading 'MSstatsShiny' 
> 
> test_check("MSstatsShiny")
Reached in evidence
Reached in evidence
Reached in evidence
Reached in evidence
Reached in unmod
Reached in unmod
Reached in proteins_group
Reached in proteins_group
Reached in proteins_group
Reached in proteins_group
Reached in maxq_ptm_sites
Reached in maxq_ptm_sites
Reached in ump annot
Reached in ump annot
Reached in ump annot
Reached in ump annot
[1] "Inside Annot"
[1] "before reading annot file"
[1] "after reading annot file"
[1] "Inside Annot"
[1] "Inside Annot"
[1] "before reading annot file"
[1] "after reading annot file"
Reached in maxq annot
Reached in maxq annot
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is  
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
[1] "list"
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
[1] "list"
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is maxq 
Reached in maxq
INFO  [2024-12-24 09:08:26] ** Raw data from MaxQuant imported successfully.
INFO  [2024-12-24 09:08:26] ** Rows with values of Potentialcontaminant equal to + are removed 
INFO  [2024-12-24 09:08:26] ** Rows with values of Reverse equal to + are removed 
INFO  [2024-12-24 09:08:26] ** Rows with values of Potentialcontaminant equal to + are removed 
INFO  [2024-12-24 09:08:26] ** Rows with values of Reverse equal to + are removed 
INFO  [2024-12-24 09:08:26] ** Rows with values of Onlyidentifiedbysite equal to + are removed 
INFO  [2024-12-24 09:08:26] ** + Contaminant, + Reverse, + Potential.contaminant, + Only.identified.by.site proteins are removed.
INFO  [2024-12-24 09:08:26] ** Raw data from MaxQuant cleaned successfully.
INFO  [2024-12-24 09:08:26] ** Using provided annotation.
INFO  [2024-12-24 09:08:26] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:26] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge
  - Shared peptides will be removed.
  - Proteins with single feature will not be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:27] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:27] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:27] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:27] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Fractionation handled.
INFO  [2024-12-24 09:08:27] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:27] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is PD 
    Confidence.Level Search.ID Processing.Node.No                      Sequence
1               High         A                  4                     SLIASTLYR
2               High         A                  4                   AYLATQGVEIR
3               High         A                  4                 NHEIIGDIVPLAK
4               High         A                  4                 NHEIIGDIVPLAK
5               High         A                  4                  YHVNQYTGDESR
6               High         A                  4               ANSHAPEAVVEGASR
7               High         A                  4              ISINSPALADPTLITR
8               High         A                  4              VAEVIDIPFcVAGGIK
9               High         A                  4               VTQWETLDWVQEVQK
10              High         A                  4            EQVGDEHIGVIPEDcYYK
11              High         A                  4         VNKLELNYDNFMEEFTAILHR
12              High         A                  4      EVcHVPLIASGGAGTMEHFLEAFR
13              High         A                  4      EVcHVPLIASGGAGTMEHFLEAFR
14              High         A                  4    VREVcHVPLIASGGAGTMEHFLEAFR
15              High         B                  4                     RIIPcLDVR
16              High         B                  4                   AYLATQGVEIR
17              High         B                  4                 NHEIIGDIVPLAK
18              High         B                  4                  YHVNQYTGDESR
19              High         B                  4               ANSHAPEAVVEGASR
20              High         B                  4               ANSHAPEAVVEGASR
21              High         B                  4               ANSHAPEAVVEGASR
22              High         B                  4              ISINSPALADPTLITR
23              High         B                  4                TVRPMFLQFIEPSK
24              High         B                  4               VTQWETLDWVQEVQK
25              High         B                  4            EQVGDEHIGVIPEDcYYK
26              High         B                  4        TNYDHPSAMDHSLLLEHLQALK
27              High         B                  4         VNKLELNYDNFMEEFTAILHR
28              High         B                  4         VNKLELNYDNFMEEFTAILHR
29              High         B                  4      EVcHVPLIASGGAGTMEHFLEAFR
30              High         B                  4      EVcHVPLIASGGAGTMEHFLEAFR
31              High         B                  4    VREVcHVPLIASGGAGTMEHFLEAFR
32              High         B                  4    VREVcHVPLIASGGAGTMEHFLEAFR
33              High         B                  4 LARPGSDVALDDQLYQEPQAAPVAVPMGK
34              High         B                  4 LARPGSDVALDDQLYQEPQAAPVAVPMGK
35              High         C                  4                       IAIDILK
36              High         C                  4                   AYLATQGVEIR
37              High         C                  4                 NHEIIGDIVPLAK
38              High         C                  4                 NHEIIGDIVPLAK
39              High         C                  4                  YHVNQYTGDESR
40              High         C                  4                  YHVNQYTGDESR
41              High         C                  4              ISINSPALADPTLITR
42              High         C                  4              VAEVIDIPFcVAGGIK
43              High         C                  4               VTQWETLDWVQEVQK
44              High         C                  4               VTQWETLDWVQEVQK
45              High         C                  4        TNYDHPSAMDHSLLLEHLQALK
46              High         C                  4         VNKLELNYDNFMEEFTAILHR
47              High         C                  4      EVcHVPLIASGGAGTMEHFLEAFR
48              High         C                  4      EVcHVPLIASGGAGTMEHFLEAFR
49              High         C                  4    VREVcHVPLIASGGAGTMEHFLEAFR
50              High         C                  4    VREVcHVPLIASGGAGTMEHFLEAFR
51              High         C                  4    VREVcHVPLIASGGAGTMEHFLEAFR
52              High         D                  4                       IAIDILK
53              High         D                  4                      ILSFGADK
54              High         D                  4                     RIIPcLDVR
55              High         D                  4                   AYLATQGVEIR
56              High         D                  4                 NHEIIGDIVPLAK
57              High         D                  4                 NHEIIGDIVPLAK
58              High         D                  4                  YHVNQYTGDESR
59              High         D                  4               ANSHAPEAVVEGASR
60              High         D                  4               ANSHAPEAVVEGASR
61              High         D                  4              ISINSPALADPTLITR
62              High         D                  4               VTQWETLDWVQEVQK
63              High         D                  4               VTQWETLDWVQEVQK
64              High         D                  4            EQVGDEHIGVIPEDcYYK
65              High         D                  4         VNKLELNYDNFMEEFTAILHR
66              High         D                  4      EVcHVPLIASGGAGTMEHFLEAFR
67              High         D                  4      EVcHVPLIASGGAGTMEHFLEAFR
68              High         D                  4    VREVcHVPLIASGGAGTMEHFLEAFR
69              High         D                  4    VREVcHVPLIASGGAGTMEHFLEAFR
70              High         E                  4                     SLIASTLYR
71              High         E                  4                     RIIPcLDVR
72              High         E                  4                   AYLATQGVEIR
73              High         E                  4                 NHEIIGDIVPLAK
74              High         E                  4                 NHEIIGDIVPLAK
75              High         E                  4                  YHVNQYTGDESR
76              High         E                  4                  YHVNQYTGDESR
77              High         E                  4               ANSHAPEAVVEGASR
78              High         E                  4               ANSHAPEAVVEGASR
79              High         E                  4               DADVDGALAASVFHK
80              High         E                  4              ISINSPALADPTLITR
81              High         E                  4               VTQWETLDWVQEVQK
82              High         E                  4               VTQWETLDWVQEVQK
83              High         E                  4      EVcHVPLIASGGAGTMEHFLEAFR
84              High         E                  4      EVcHVPLIASGGAGTMEHFLEAFR
85              High         E                  4    VREVcHVPLIASGGAGTMEHFLEAFR
86              High         E                  4    VREVcHVPLIASGGAGTMEHFLEAFR
87              High         F                  4                     QIINIGELK
88              High         F                  4                   AYLATQGVEIR
89              High         F                  4                 NHEIIGDIVPLAK
90              High         F                  4                 NHEIIGDIVPLAK
91              High         F                  4               ANSHAPEAVVEGASR
92              High         F                  4               ANSHAPEAVVEGASR
93              High         F                  4               DADVDGALAASVFHK
94              High         F                  4              ISINSPALADPTLITR
95              High         F                  4              VAEVIDIPFcVAGGIK
96              High         F                  4             RGAGEIVLNMMNQDGVR
97              High         F                  4               VTQWETLDWVQEVQK
98              High         F                  4               VTQWETLDWVQEVQK
99              High         F                  4        VLTPDVVGIDALVHDHQTVLAK
100             High         F                  4        TNYDHPSAMDHSLLLEHLQALK
101             High         F                  4      EVcHVPLIASGGAGTMEHFLEAFR
102             High         F                  4      EVcHVPLIASGGAGTMEHFLEAFR
103             High         F                  4    VREVcHVPLIASGGAGTMEHFLEAFR
104             High         F                  4    VREVcHVPLIASGGAGTMEHFLEAFR
105             High         F                  4    VREVcHVPLIASGGAGTMEHFLEAFR
106             High         F                  4 LARPGSDVALDDQLYQEPQAAPVAVPMGK
107             High         G                  4                      ILSFGADK
108             High         G                  4                   AYLATQGVEIR
109             High         G                  4                 NHEIIGDIVPLAK
110             High         G                  4                 NHEIIGDIVPLAK
111             High         G                  4                  YHVNQYTGDESR
112             High         G                  4               ANSHAPEAVVEGASR
113             High         G                  4               ANSHAPEAVVEGASR
114             High         G                  4              ISINSPALADPTLITR
115             High         G                  4              VAEVIDIPFcVAGGIK
116             High         G                  4               VTQWETLDWVQEVQK
117             High         G                  4         VNKLELNYDNFMEEFTAILHR
118             High         G                  4      EVcHVPLIASGGAGTMEHFLEAFR
119             High         G                  4      EVcHVPLIASGGAGTMEHFLEAFR
120             High         G                  4    VREVcHVPLIASGGAGTMEHFLEAFR
121             High         H                  4                       IAIDILK
122             High         H                  4                   AYLATQGVEIR
123             High         H                  4                 NHEIIGDIVPLAK
124             High         H                  4               ANSHAPEAVVEGASR
125             High         H                  4              ISINSPALADPTLITR
126             High         H                  4              VAEVIDIPFcVAGGIK
127             High         H                  4               VTQWETLDWVQEVQK
128             High         H                  4        TNYDHPSAMDHSLLLEHLQALK
129             High         H                  4         ELREQVGDEHIGVIPEDcYYK
130             High         H                  4         VNKLELNYDNFMEEFTAILHR
131             High         H                  4      EVcHVPLIASGGAGTMEHFLEAFR
132             High         H                  4      EVcHVPLIASGGAGTMEHFLEAFR
133             High         H                  4    VREVcHVPLIASGGAGTMEHFLEAFR
134             High         H                  4    VREVcHVPLIASGGAGTMEHFLEAFR
135             High         H                  4 LARPGSDVALDDQLYQEPQAAPVAVPMGK
136             High         I                  4                      ILSFGADK
137             High         I                  4                      LDEGcTER
138             High         I                  4                   AYLATQGVEIR
139             High         I                  4                 NHEIIGDIVPLAK
140             High         I                  4                 NHEIIGDIVPLAK
141             High         I                  4               ANSHAPEAVVEGASR
142             High         I                  4               ANSHAPEAVVEGASR
143             High         I                  4               ANSHAPEAVVEGASR
144             High         I                  4              ISINSPALADPTLITR
145             High         I                  4               VTQWETLDWVQEVQK
146             High         I                  4            EQVGDEHIGVIPEDcYYK
147             High         I                  4         VNKLELNYDNFMEEFTAILHR
148             High         I                  4      EVcHVPLIASGGAGTMEHFLEAFR
149             High         I                  4      EVcHVPLIASGGAGTMEHFLEAFR
150             High         I                  4    VREVcHVPLIASGGAGTMEHFLEAFR
151             High         I                  4    VREVcHVPLIASGGAGTMEHFLEAFR
152             High         J                  4                 NHEIIGDIVPLAK
153             High         J                  4               ANSHAPEAVVEGASR
154             High         J                  4               DADVDGALAASVFHK
155             High         J                  4              ISINSPALADPTLITR
156             High         J                  4               VTQWETLDWVQEVQK
157             High         J                  4               VTQWETLDWVQEVQK
158             High         J                  4        TNYDHPSAMDHSLLLEHLQALK
159             High         J                  4         ELREQVGDEHIGVIPEDcYYK
160             High         J                  4         VNKLELNYDNFMEEFTAILHR
161             High         J                  4      EVcHVPLIASGGAGTMEHFLEAFR
162             High         J                  4      EVcHVPLIASGGAGTMEHFLEAFR
163             High         J                  4    VREVcHVPLIASGGAGTMEHFLEAFR
164             High         J                  4    VREVcHVPLIASGGAGTMEHFLEAFR
165             High         K                  4                      LDEGcTER
166             High         K                  4                     RIIPcLDVR
167             High         K                  4                   AYLATQGVEIR
168             High         K                  4                 NHEIIGDIVPLAK
169             High         K                  4                 NHEIIGDIVPLAK
170             High         K                  4               ANSHAPEAVVEGASR
171             High         K                  4               ANSHAPEAVVEGASR
172             High         K                  4              ISINSPALADPTLITR
173             High         K                  4               VTQWETLDWVQEVQK
174             High         K                  4               VTQWETLDWVQEVQK
175             High         K                  4            EQVGDEHIGVIPEDcYYK
176             High         K                  4         VNKLELNYDNFMEEFTAILHR
177             High         K                  4      EVcHVPLIASGGAGTMEHFLEAFR
178             High         K                  4    VREVcHVPLIASGGAGTMEHFLEAFR
179             High         L                  4                     QIINIGELK
180             High         L                  4                     RIIPcLDVR
181             High         L                  4                 NHEIIGDIVPLAK
182             High         L                  4                  YHVNQYTGDESR
183             High         L                  4                  YHVNQYTGDESR
184             High         L                  4               ANSHAPEAVVEGASR
185             High         L                  4               ANSHAPEAVVEGASR
186             High         L                  4               DADVDGALAASVFHK
187             High         L                  4              ISINSPALADPTLITR
188             High         L                  4              VAEVIDIPFcVAGGIK
189             High         L                  4               VTQWETLDWVQEVQK
190             High         L                  4               VTQWETLDWVQEVQK
191             High         L                  4               VTQWETLDWVQEVQK
192             High         L                  4            EQVGDEHIGVIPEDcYYK
193             High         L                  4         ELREQVGDEHIGVIPEDcYYK
194             High         L                  4      EVcHVPLIASGGAGTMEHFLEAFR
195             High         L                  4      EVcHVPLIASGGAGTMEHFLEAFR
196             High         L                  4    VREVcHVPLIASGGAGTMEHFLEAFR
197             High         L                  4    VREVcHVPLIASGGAGTMEHFLEAFR
198             High         L                  4    VREVcHVPLIASGGAGTMEHFLEAFR
199             High         M                  4                 NHEIIGDIVPLAK
200             High         M                  4                 NHEIIGDIVPLAK
201             High         M                  4                  YHVNQYTGDESR
202             High         M                  4               ANSHAPEAVVEGASR
203             High         M                  4               ANSHAPEAVVEGASR
204             High         M                  4               DADVDGALAASVFHK
205             High         M                  4              ISINSPALADPTLITR
206             High         M                  4              VAEVIDIPFcVAGGIK
207             High         M                  4             RGAGEIVLNMMNQDGVR
208             High         M                  4               VTQWETLDWVQEVQK
209             High         M                  4            EQVGDEHIGVIPEDcYYK
210             High         M                  4        TNYDHPSAMDHSLLLEHLQALK
211             High         M                  4         VNKLELNYDNFMEEFTAILHR
212             High         M                  4         VNKLELNYDNFMEEFTAILHR
213             High         M                  4      EVcHVPLIASGGAGTMEHFLEAFR
214             High         M                  4      EVcHVPLIASGGAGTMEHFLEAFR
215             High         M                  4    VREVcHVPLIASGGAGTMEHFLEAFR
216             High         M                  4   RGAGEIVLNMMNQDGVRNGYDLEQLKK
217             High         N                  4                 NHEIIGDIVPLAK
218             High         N                  4                  YHVNQYTGDESR
219             High         N                  4               ANSHAPEAVVEGASR
220             High         N                  4               ANSHAPEAVVEGASR
221             High         N                  4               DADVDGALAASVFHK
222             High         N                  4              ISINSPALADPTLITR
223             High         N                  4              VAEVIDIPFcVAGGIK
224             High         N                  4               VTQWETLDWVQEVQK
225             High         N                  4               VTQWETLDWVQEVQK
226             High         N                  4         ELREQVGDEHIGVIPEDcYYK
227             High         N                  4         VNKLELNYDNFMEEFTAILHR
228             High         N                  4      EVcHVPLIASGGAGTMEHFLEAFR
229             High         N                  4      EVcHVPLIASGGAGTMEHFLEAFR
230             High         N                  4    VREVcHVPLIASGGAGTMEHFLEAFR
231             High         N                  4    VREVcHVPLIASGGAGTMEHFLEAFR
232             High         O                  4                      LDEGcTER
233             High         O                  4                     RIIPcLDVR
234             High         O                  4                 NHEIIGDIVPLAK
235             High         O                  4                 NHEIIGDIVPLAK
236             High         O                  4               ANSHAPEAVVEGASR
237             High         O                  4               ANSHAPEAVVEGASR
238             High         O                  4               DADVDGALAASVFHK
239             High         O                  4              ISINSPALADPTLITR
240             High         O                  4               VTQWETLDWVQEVQK
241             High         O                  4               VTQWETLDWVQEVQK
242             High         O                  4            EQVGDEHIGVIPEDcYYK
243             High         O                  4         VNKLELNYDNFMEEFTAILHR
244             High         O                  4         VNKLELNYDNFMEEFTAILHR
245             High         O                  4      EVcHVPLIASGGAGTMEHFLEAFR
246             High         O                  4    VREVcHVPLIASGGAGTMEHFLEAFR
247             High         O                  4    VREVcHVPLIASGGAGTMEHFLEAFR
    Unique.Sequence.ID PSM.Ambiguity
1                 1327   Unambiguous
2                 2889   Unambiguous
3                 4700   Unambiguous
4                 4700   Unambiguous
5                 5209   Unambiguous
6                 5423   Unambiguous
7                 7264   Unambiguous
8                 7318   Unambiguous
9                 9000   Unambiguous
10               10878   Unambiguous
11               13339   Unambiguous
12               13435   Unambiguous
13               13435   Unambiguous
14               14476   Unambiguous
15               20590   Unambiguous
16                2889   Unambiguous
17                4700   Unambiguous
18                5209   Unambiguous
19                5423   Unambiguous
20                5423   Unambiguous
21                5423   Unambiguous
22                7264   Unambiguous
23               25910   Unambiguous
24                9000   Unambiguous
25               10878   Unambiguous
26               31721   Unambiguous
27               13339   Unambiguous
28               13339   Unambiguous
29               13435   Unambiguous
30               13435   Unambiguous
31               14476   Unambiguous
32               14476   Unambiguous
33               33551   Unambiguous
34               33551   Unambiguous
35               37169   Unambiguous
36                2889   Unambiguous
37                4700   Unambiguous
38                4700   Unambiguous
39                5209   Unambiguous
40                5209   Unambiguous
41                7264   Unambiguous
42                7318   Unambiguous
43                9000   Unambiguous
44                9000   Unambiguous
45               31721   Unambiguous
46               13339   Unambiguous
47               13435   Unambiguous
48               13435   Unambiguous
49               14476   Unambiguous
50               14476   Unambiguous
51               14476   Unambiguous
52               37169   Unambiguous
53               56001   Unambiguous
54               20590   Unambiguous
55                2889   Unambiguous
56                4700   Unambiguous
57                4700   Unambiguous
58                5209   Unambiguous
59                5423   Unambiguous
60                5423   Unambiguous
61                7264   Unambiguous
62                9000   Unambiguous
63                9000   Unambiguous
64               10878   Unambiguous
65               13339   Unambiguous
66               13435   Unambiguous
67               13435   Unambiguous
68               14476   Unambiguous
69               14476   Unambiguous
70                1327   Unambiguous
71               20590   Unambiguous
72                2889   Unambiguous
73                4700   Unambiguous
74                4700   Unambiguous
75                5209   Unambiguous
76                5209   Unambiguous
77                5423   Unambiguous
78                5423   Unambiguous
79               79370   Unambiguous
80                7264   Unambiguous
81                9000   Unambiguous
82                9000   Unambiguous
83               13435   Unambiguous
84               13435   Unambiguous
85               14476   Unambiguous
86               14476   Unambiguous
87               93470   Unambiguous
88                2889   Unambiguous
89                4700   Unambiguous
90                4700   Unambiguous
91                5423   Unambiguous
92                5423   Unambiguous
93               79370   Unambiguous
94                7264   Unambiguous
95                7318   Unambiguous
96              100910   Unambiguous
97                9000   Unambiguous
98                9000   Unambiguous
99              104296   Unambiguous
100              31721   Unambiguous
101              13435   Unambiguous
102              13435   Unambiguous
103              14476   Unambiguous
104              14476   Unambiguous
105              14476   Unambiguous
106              33551   Unambiguous
107              56001   Unambiguous
108               2889   Unambiguous
109               4700   Unambiguous
110               4700   Unambiguous
111               5209   Unambiguous
112               5423   Unambiguous
113               5423   Unambiguous
114               7264   Unambiguous
115               7318   Unambiguous
116               9000   Unambiguous
117              13339   Unambiguous
118              13435   Unambiguous
119              13435   Unambiguous
120              14476   Unambiguous
121              37169   Unambiguous
122               2889   Unambiguous
123               4700   Unambiguous
124               5423   Unambiguous
125               7264   Unambiguous
126               7318   Unambiguous
127               9000   Unambiguous
128              31721   Unambiguous
129             141684   Unambiguous
130              13339   Unambiguous
131              13435   Unambiguous
132              13435   Unambiguous
133              14476   Unambiguous
134              14476   Unambiguous
135              33551   Unambiguous
136              56001   Unambiguous
137             147995   Unambiguous
138               2889   Unambiguous
139               4700   Unambiguous
140               4700   Unambiguous
141               5423   Unambiguous
142               5423   Unambiguous
143               5423   Unambiguous
144               7264   Unambiguous
145               9000   Unambiguous
146              10878   Unambiguous
147              13339   Unambiguous
148              13435   Unambiguous
149              13435   Unambiguous
150              14476   Unambiguous
151              14476   Unambiguous
152               4700   Unambiguous
153               5423   Unambiguous
154              79370   Unambiguous
155               7264   Unambiguous
156               9000   Unambiguous
157               9000   Unambiguous
158              31721   Unambiguous
159             141684   Unambiguous
160              13339   Unambiguous
161              13435   Unambiguous
162              13435   Unambiguous
163              14476   Unambiguous
164              14476   Unambiguous
165             147995   Unambiguous
166              20590   Unambiguous
167               2889   Unambiguous
168               4700   Unambiguous
169               4700   Unambiguous
170               5423   Unambiguous
171               5423   Unambiguous
172               7264   Unambiguous
173               9000   Unambiguous
174               9000   Unambiguous
175              10878   Unambiguous
176              13339   Unambiguous
177              13435   Unambiguous
178              14476   Unambiguous
179              93470   Unambiguous
180              20590   Unambiguous
181               4700   Unambiguous
182               5209   Unambiguous
183               5209   Unambiguous
184               5423   Unambiguous
185               5423   Unambiguous
186              79370   Unambiguous
187               7264   Unambiguous
188               7318   Unambiguous
189               9000   Unambiguous
190               9000   Unambiguous
191               9000   Unambiguous
192              10878   Unambiguous
193             141684   Unambiguous
194              13435   Unambiguous
195              13435   Unambiguous
196              14476   Unambiguous
197              14476   Unambiguous
198              14476   Unambiguous
199               4700   Unambiguous
200               4700   Unambiguous
201               5209   Unambiguous
202               5423   Unambiguous
203               5423   Unambiguous
204              79370   Unambiguous
205               7264   Unambiguous
206               7318   Unambiguous
207             100910   Unambiguous
208               9000   Unambiguous
209              10878   Unambiguous
210              31721   Unambiguous
211              13339   Unambiguous
212              13339   Unambiguous
213              13435   Unambiguous
214              13435   Unambiguous
215              14476   Unambiguous
216             237005   Unambiguous
217               4700   Unambiguous
218               5209   Unambiguous
219               5423   Unambiguous
220               5423   Unambiguous
221              79370   Unambiguous
222               7264   Unambiguous
223               7318   Unambiguous
224               9000   Unambiguous
225               9000   Unambiguous
226             141684   Unambiguous
227              13339   Unambiguous
228              13435   Unambiguous
229              13435   Unambiguous
230              14476   Unambiguous
231              14476   Unambiguous
232             147995   Unambiguous
233              20590   Unambiguous
234               4700   Unambiguous
235               4700   Unambiguous
236               5423   Unambiguous
237               5423   Unambiguous
238              79370   Unambiguous
239               7264   Unambiguous
240               9000   Unambiguous
241               9000   Unambiguous
242              10878   Unambiguous
243              13339   Unambiguous
244              13339   Unambiguous
245              13435   Unambiguous
246              14476   Unambiguous
247              14476   Unambiguous
                                                                                                    Protein.Descriptions
1                                         Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
2   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
3   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
4   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
5   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
6                                         Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
7   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
8   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
9   Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
10                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
11                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
12  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
13  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
14  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
15  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
16  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
17  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
18  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
19                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
20                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
21                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
22  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
23                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
24  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
25                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
26                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
27                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
28                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
29  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
30  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
31  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
32  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
33                                Primosomal protein 1 OS=Escherichia coli (strain K12) GN=dnaT PE=1 SV=2 - [DNAT_ECOLI]
34                                Primosomal protein 1 OS=Escherichia coli (strain K12) GN=dnaT PE=1 SV=2 - [DNAT_ECOLI]
35                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
36  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
37  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
38  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
39  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
40  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
41  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
42  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
43  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
44  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
45                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
46                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
47  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
48  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
49  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
50  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
51  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
52                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
53  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
54  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
55  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
56  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
57  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
58  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
59                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
60                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
61  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
62  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
63  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
64                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
65                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
66  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
67  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
68  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
69  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
70                                        Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
71  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
72  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
73  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
74  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
75  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
76  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
77                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
78                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
79  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
80  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
81  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
82  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
83  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
84  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
85  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
86  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
87  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
88  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
89  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
90  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
91                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
92                                        Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
93  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
94  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
95  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
96  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
97  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
98  Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
99                                Primosomal protein 1 OS=Escherichia coli (strain K12) GN=dnaT PE=1 SV=2 - [DNAT_ECOLI]
100                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
101 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
102 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
103 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
104 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
105 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
106                               Primosomal protein 1 OS=Escherichia coli (strain K12) GN=dnaT PE=1 SV=2 - [DNAT_ECOLI]
107 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
108 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
109 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
110 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
111 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
112                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
113                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
114 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
115 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
116 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
117                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
118 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
119 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
120 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
121                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
122 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
123 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
124                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
125 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
126 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
127 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
128                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
129                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
130                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
131 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
132 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
133 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
134 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
135                               Primosomal protein 1 OS=Escherichia coli (strain K12) GN=dnaT PE=1 SV=2 - [DNAT_ECOLI]
136 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
137            Fumarate reductase flavoprotein subunit OS=Escherichia coli (strain K12) GN=frdA PE=1 SV=3 - [FRDA_ECOLI]
138 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
139 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
140 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
141                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
142                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
143                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
144 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
145 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
146                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
147                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
148 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
149 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
150 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
151 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
152 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
153                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
154 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
155 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
156 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
157 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
158                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
159                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
160                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
161 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
162 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
163 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
164 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
165            Fumarate reductase flavoprotein subunit OS=Escherichia coli (strain K12) GN=frdA PE=1 SV=3 - [FRDA_ECOLI]
166 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
167 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
168 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
169 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
170                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
171                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
172 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
173 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
174 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
175                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
176                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
177 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
178 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
179 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
180 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
181 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
182 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
183 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
184                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
185                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
186 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
187 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
188 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
189 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
190 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
191 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
192                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
193                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
194 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
195 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
196 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
197 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
198 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
199 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
200 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
201 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
202                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
203                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
204 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
205 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
206 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
207 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
208 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
209                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
210                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
211                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
212                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
213 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
214 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
215 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
216 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
217 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
218 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
219                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
220                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
221 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
222 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
223 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
224 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
225 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
226                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
227                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
228 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
229 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
230 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
231 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
232            Fumarate reductase flavoprotein subunit OS=Escherichia coli (strain K12) GN=frdA PE=1 SV=3 - [FRDA_ECOLI]
233 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
234 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
235 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
236                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
237                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
238 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
239 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
240 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
241 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
242                                       Uridine kinase OS=Escherichia coli (strain K12) GN=udk PE=3 SV=1 - [URK_ECOLI]
243                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
244                                       Protein TolQ OS=Escherichia coli (strain K12) GN=tolQ PE=1 SV=1 - [TOLQ_ECOLI]
245 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
246 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
247 Imidazole glycerol phosphate synthase subunit HisF OS=Escherichia coli (strain K12) GN=hisF PE=1 SV=1 - [HIS6_ECOLI]
    X..Proteins X..Protein.Groups Protein.Group.Accessions        Modifications
1             1                 1                   P0A8F4                     
2             1                 1                   P60664                     
3             1                 1                   P60664                     
4             1                 1                   P60664                     
5             1                 1                   P60664                     
6             1                 1                   P0ABU9                     
7             1                 1                   P60664                     
8             1                 1                   P60664 C10(Carbamidomethyl)
9             1                 1                   P60664                     
10            1                 1                   P0A8F4 C15(Carbamidomethyl)
11            1                 1                   P0ABU9                     
12            1                 1                   P60664  C3(Carbamidomethyl)
13            1                 1                   P60664  C3(Carbamidomethyl)
14            1                 1                   P60664  C5(Carbamidomethyl)
15            1                 1                   P60664  C5(Carbamidomethyl)
16            1                 1                   P60664                     
17            1                 1                   P60664                     
18            1                 1                   P60664                     
19            1                 1                   P0ABU9                     
20            1                 1                   P0ABU9                     
21            1                 1                   P0ABU9                     
22            1                 1                   P60664                     
23            1                 1                   P0A8F4                     
24            1                 1                   P60664                     
25            1                 1                   P0A8F4 C15(Carbamidomethyl)
26            1                 1                   P0A8F4                     
27            1                 1                   P0ABU9                     
28            1                 1                   P0ABU9                     
29            1                 1                   P60664  C3(Carbamidomethyl)
30            1                 1                   P60664  C3(Carbamidomethyl)
31            1                 1                   P60664  C5(Carbamidomethyl)
32            1                 1                   P60664  C5(Carbamidomethyl)
33            1                 1                   P0A8J2                     
34            1                 1                   P0A8J2                     
35            1                 1                   P0A8F4                     
36            1                 1                   P60664                     
37            1                 1                   P60664                     
38            1                 1                   P60664                     
39            1                 1                   P60664                     
40            1                 1                   P60664                     
41            1                 1                   P60664                     
42            1                 1                   P60664 C10(Carbamidomethyl)
43            1                 1                   P60664                     
44            1                 1                   P60664                     
45            1                 1                   P0A8F4                     
46            1                 1                   P0ABU9                     
47            1                 1                   P60664  C3(Carbamidomethyl)
48            1                 1                   P60664  C3(Carbamidomethyl)
49            1                 1                   P60664  C5(Carbamidomethyl)
50            1                 1                   P60664  C5(Carbamidomethyl)
51            1                 1                   P60664  C5(Carbamidomethyl)
52            1                 1                   P0A8F4                     
53            1                 1                   P60664                     
54            1                 1                   P60664  C5(Carbamidomethyl)
55            1                 1                   P60664                     
56            1                 1                   P60664                     
57            1                 1                   P60664                     
58            1                 1                   P60664                     
59            1                 1                   P0ABU9                     
60            1                 1                   P0ABU9                     
61            1                 1                   P60664                     
62            1                 1                   P60664                     
63            1                 1                   P60664                     
64            1                 1                   P0A8F4 C15(Carbamidomethyl)
65            1                 1                   P0ABU9                     
66            1                 1                   P60664  C3(Carbamidomethyl)
67            1                 1                   P60664  C3(Carbamidomethyl)
68            1                 1                   P60664  C5(Carbamidomethyl)
69            1                 1                   P60664  C5(Carbamidomethyl)
70            1                 1                   P0A8F4                     
71            1                 1                   P60664  C5(Carbamidomethyl)
72            1                 1                   P60664                     
73            1                 1                   P60664                     
74            1                 1                   P60664                     
75            1                 1                   P60664                     
76            1                 1                   P60664                     
77            1                 1                   P0ABU9                     
78            1                 1                   P0ABU9                     
79            1                 1                   P60664                     
80            1                 1                   P60664                     
81            1                 1                   P60664                     
82            1                 1                   P60664                     
83            1                 1                   P60664  C3(Carbamidomethyl)
84            1                 1                   P60664  C3(Carbamidomethyl)
85            1                 1                   P60664  C5(Carbamidomethyl)
86            1                 1                   P60664  C5(Carbamidomethyl)
87            1                 1                   P60664                     
88            1                 1                   P60664                     
89            1                 1                   P60664                     
90            1                 1                   P60664                     
91            1                 1                   P0ABU9                     
92            1                 1                   P0ABU9                     
93            1                 1                   P60664                     
94            1                 1                   P60664                     
95            1                 1                   P60664 C10(Carbamidomethyl)
96            1                 1                   P60664                     
97            1                 1                   P60664                     
98            1                 1                   P60664                     
99            1                 1                   P0A8J2                     
100           1                 1                   P0A8F4                     
101           1                 1                   P60664  C3(Carbamidomethyl)
102           1                 1                   P60664  C3(Carbamidomethyl)
103           1                 1                   P60664  C5(Carbamidomethyl)
104           1                 1                   P60664  C5(Carbamidomethyl)
105           1                 1                   P60664  C5(Carbamidomethyl)
106           1                 1                   P0A8J2                     
107           1                 1                   P60664                     
108           1                 1                   P60664                     
109           1                 1                   P60664                     
110           1                 1                   P60664                     
111           1                 1                   P60664                     
112           1                 1                   P0ABU9                     
113           1                 1                   P0ABU9                     
114           1                 1                   P60664                     
115           1                 1                   P60664 C10(Carbamidomethyl)
116           1                 1                   P60664                     
117           1                 1                   P0ABU9                     
118           1                 1                   P60664  C3(Carbamidomethyl)
119           1                 1                   P60664  C3(Carbamidomethyl)
120           1                 1                   P60664  C5(Carbamidomethyl)
121           1                 1                   P0A8F4                     
122           1                 1                   P60664                     
123           1                 1                   P60664                     
124           1                 1                   P0ABU9                     
125           1                 1                   P60664                     
126           1                 1                   P60664 C10(Carbamidomethyl)
127           1                 1                   P60664                     
128           1                 1                   P0A8F4                     
129           1                 1                   P0A8F4 C18(Carbamidomethyl)
130           1                 1                   P0ABU9                     
131           1                 1                   P60664  C3(Carbamidomethyl)
132           1                 1                   P60664  C3(Carbamidomethyl)
133           1                 1                   P60664  C5(Carbamidomethyl)
134           1                 1                   P60664  C5(Carbamidomethyl)
135           1                 1                   P0A8J2                     
136           1                 1                   P60664                     
137           1                 1                   P00363  C5(Carbamidomethyl)
138           1                 1                   P60664                     
139           1                 1                   P60664                     
140           1                 1                   P60664                     
141           1                 1                   P0ABU9                     
142           1                 1                   P0ABU9                     
143           1                 1                   P0ABU9                     
144           1                 1                   P60664                     
145           1                 1                   P60664                     
146           1                 1                   P0A8F4 C15(Carbamidomethyl)
147           1                 1                   P0ABU9                     
148           1                 1                   P60664  C3(Carbamidomethyl)
149           1                 1                   P60664  C3(Carbamidomethyl)
150           1                 1                   P60664  C5(Carbamidomethyl)
151           1                 1                   P60664  C5(Carbamidomethyl)
152           1                 1                   P60664                     
153           1                 1                   P0ABU9                     
154           1                 1                   P60664                     
155           1                 1                   P60664                     
156           1                 1                   P60664                     
157           1                 1                   P60664                     
158           1                 1                   P0A8F4                     
159           1                 1                   P0A8F4 C18(Carbamidomethyl)
160           1                 1                   P0ABU9                     
161           1                 1                   P60664  C3(Carbamidomethyl)
162           1                 1                   P60664  C3(Carbamidomethyl)
163           1                 1                   P60664  C5(Carbamidomethyl)
164           1                 1                   P60664  C5(Carbamidomethyl)
165           1                 1                   P00363  C5(Carbamidomethyl)
166           1                 1                   P60664  C5(Carbamidomethyl)
167           1                 1                   P60664                     
168           1                 1                   P60664                     
169           1                 1                   P60664                     
170           1                 1                   P0ABU9                     
171           1                 1                   P0ABU9                     
172           1                 1                   P60664                     
173           1                 1                   P60664                     
174           1                 1                   P60664                     
175           1                 1                   P0A8F4 C15(Carbamidomethyl)
176           1                 1                   P0ABU9                     
177           1                 1                   P60664  C3(Carbamidomethyl)
178           1                 1                   P60664  C5(Carbamidomethyl)
179           1                 1                   P60664                     
180           1                 1                   P60664  C5(Carbamidomethyl)
181           1                 1                   P60664                     
182           1                 1                   P60664                     
183           1                 1                   P60664                     
184           1                 1                   P0ABU9                     
185           1                 1                   P0ABU9                     
186           1                 1                   P60664                     
187           1                 1                   P60664                     
188           1                 1                   P60664 C10(Carbamidomethyl)
189           1                 1                   P60664                     
190           1                 1                   P60664                     
191           1                 1                   P60664                     
192           1                 1                   P0A8F4 C15(Carbamidomethyl)
193           1                 1                   P0A8F4 C18(Carbamidomethyl)
194           1                 1                   P60664  C3(Carbamidomethyl)
195           1                 1                   P60664  C3(Carbamidomethyl)
196           1                 1                   P60664  C5(Carbamidomethyl)
197           1                 1                   P60664  C5(Carbamidomethyl)
198           1                 1                   P60664  C5(Carbamidomethyl)
199           1                 1                   P60664                     
200           1                 1                   P60664                     
201           1                 1                   P60664                     
202           1                 1                   P0ABU9                     
203           1                 1                   P0ABU9                     
204           1                 1                   P60664                     
205           1                 1                   P60664                     
206           1                 1                   P60664 C10(Carbamidomethyl)
207           1                 1                   P60664                     
208           1                 1                   P60664                     
209           1                 1                   P0A8F4 C15(Carbamidomethyl)
210           1                 1                   P0A8F4                     
211           1                 1                   P0ABU9                     
212           1                 1                   P0ABU9                     
213           1                 1                   P60664  C3(Carbamidomethyl)
214           1                 1                   P60664  C3(Carbamidomethyl)
215           1                 1                   P60664  C5(Carbamidomethyl)
216           1                 1                   P60664                     
217           1                 1                   P60664                     
218           1                 1                   P60664                     
219           1                 1                   P0ABU9                     
220           1                 1                   P0ABU9                     
221           1                 1                   P60664                     
222           1                 1                   P60664                     
223           1                 1                   P60664 C10(Carbamidomethyl)
224           1                 1                   P60664                     
225           1                 1                   P60664                     
226           1                 1                   P0A8F4 C18(Carbamidomethyl)
227           1                 1                   P0ABU9                     
228           1                 1                   P60664  C3(Carbamidomethyl)
229           1                 1                   P60664  C3(Carbamidomethyl)
230           1                 1                   P60664  C5(Carbamidomethyl)
231           1                 1                   P60664  C5(Carbamidomethyl)
232           1                 1                   P00363  C5(Carbamidomethyl)
233           1                 1                   P60664  C5(Carbamidomethyl)
234           1                 1                   P60664                     
235           1                 1                   P60664                     
236           1                 1                   P0ABU9                     
237           1                 1                   P0ABU9                     
238           1                 1                   P60664                     
239           1                 1                   P60664                     
240           1                 1                   P60664                     
241           1                 1                   P60664                     
242           1                 1                   P0A8F4 C15(Carbamidomethyl)
243           1                 1                   P0ABU9                     
244           1                 1                   P0ABU9                     
245           1                 1                   P60664  C3(Carbamidomethyl)
246           1                 1                   P60664  C5(Carbamidomethyl)
247           1                 1                   P60664  C5(Carbamidomethyl)
    Activation.Type DeltaScore DeltaCn Rank Search.Engine.Rank Precursor.Area
1               CID          1       0    1                  1       3.26e+07
2               CID          1       0    1                  1       2.71e+08
3               CID          1       0    1                  1       1.40e+08
4               CID          1       0    1                  1       2.13e+08
5               CID          1       0    1                  1       5.43e+06
6               CID          1       0    1                  1       2.14e+07
7               CID          1       0    1                  1       4.83e+08
8               CID          1       0    1                  1       3.25e+08
9               CID          1       0    1                  1       2.75e+08
10              CID          1       0    1                  1       2.39e+07
11              CID          1       0    1                  1       2.97e+07
12              CID          1       0    1                  1       2.52e+08
13              CID          1       0    1                  1       5.20e+08
14              CID          1       0    1                  1       1.48e+08
15              CID          1       0    1                  1       3.43e+08
16              CID          1       0    1                  1       2.53e+08
17              CID          1       0    1                  1       1.35e+08
18              CID          1       0    1                  1       2.21e+06
19              CID          1       0    1                  1       1.75e+07
20              CID          1       0    1                  1       2.54e+07
21              CID          1       0    1                  1       1.75e+07
22              CID          1       0    1                  1       4.85e+08
23              CID          1       0    1                  1       2.99e+07
24              CID          1       0    1                  1       2.86e+08
25              CID          1       0    1                  1       2.27e+07
26              CID          1       0    1                  1       1.18e+08
27              CID          1       0    1                  1       2.72e+07
28              CID          1       0    1                  1       2.72e+07
29              CID          1       0    1                  1       5.20e+08
30              CID          1       0    1                  1       2.72e+08
31              CID          1       0    1                  1       1.40e+08
32              CID          1       0    1                  1       1.40e+08
33              CID          1       0    1                  1       4.47e+07
34              CID          1       0    1                  1       4.47e+07
35              CID          1       0    1                  1             NA
36              CID          1       0    1                  1       2.33e+08
37              CID          1       0    1                  1       1.24e+08
38              CID          1       0    1                  1       1.97e+08
39              CID          1       0    1                  1       4.20e+06
40              CID          1       0    1                  1       4.20e+06
41              CID          1       0    1                  1       4.84e+08
42              CID          1       0    1                  1       2.86e+08
43              CID          1       0    1                  1       2.31e+08
44              CID          1       0    1                  1       5.24e+07
45              CID          1       0    1                  1       3.40e+07
46              CID          1       0    1                  1       2.52e+07
47              CID          1       0    1                  1       4.51e+08
48              CID          1       0    1                  1       2.10e+08
49              CID          1       0    1                  1       1.80e+08
50              CID          1       0    1                  1       1.80e+08
51              CID          1       0    1                  1       5.22e+07
52              CID          1       0    1                  1       9.72e+06
53              CID          1       0    1                  1       1.04e+08
54              CID          1       0    1                  1       2.97e+08
55              CID          1       0    1                  1       2.39e+08
56              CID          1       0    1                  1       2.10e+08
57              CID          1       0    1                  1       1.19e+08
58              CID          1       0    1                  1       2.30e+06
59              CID          1       0    1                  1       1.16e+07
60              CID          1       0    1                  1       2.26e+07
61              CID          1       0    1                  1       4.20e+08
62              CID          1       0    1                  1       2.35e+08
63              CID          1       0    1                  1       5.73e+07
64              CID          1       0    1                  1       1.94e+07
65              CID          1       0    1                  1       1.61e+07
66              CID          1       0    1                  1       3.93e+08
67              CID          1       0    1                  1       1.50e+08
68              CID          1       0    1                  1       9.82e+07
69              CID          1       0    1                  1       9.82e+07
70              CID          1       0    1                  1       3.72e+07
71              CID          1       0    1                  1       3.61e+08
72              CID          1       0    1                  1       2.60e+08
73              CID          1       0    1                  1       1.12e+08
74              CID          1       0    1                  1       2.09e+08
75              CID          1       0    1                  1       5.43e+06
76              CID          1       0    1                  1       4.09e+06
77              CID          1       0    1                  1       1.20e+07
78              CID          1       0    1                  1       2.92e+07
79              CID          1       0    1                  1       8.62e+07
80              CID          1       0    1                  1       5.24e+08
81              CID          1       0    1                  1       2.71e+08
82              CID          1       0    1                  1       4.20e+07
83              CID          1       0    1                  1       4.85e+08
84              CID          1       0    1                  1       2.92e+08
85              CID          1       0    1                  1       1.83e+08
86              CID          1       0    1                  1       1.83e+08
87              CID          1       0    1                  1             NA
88              CID          1       0    1                  1       2.48e+08
89              CID          1       0    1                  1       1.36e+08
90              CID          1       0    1                  1       2.27e+08
91              CID          1       0    1                  1       1.62e+07
92              CID          1       0    1                  1       2.66e+07
93              CID          1       0    1                  1       9.20e+07
94              CID          1       0    1                  1       5.90e+08
95              CID          1       0    1                  1       4.01e+08
96              CID          1       0    1                  1       2.49e+07
97              CID          1       0    1                  1       5.10e+07
98              CID          1       0    1                  1       2.28e+08
99              CID          1       0    1                  1       2.34e+07
100             CID          1       0    1                  1       5.44e+07
101             CID          1       0    1                  1       5.13e+08
102             CID          1       0    1                  1       2.00e+08
103             CID          1       0    1                  1       1.85e+08
104             CID          1       0    1                  1       1.85e+08
105             CID          1       0    1                  1       5.08e+07
106             CID          1       0    1                  1       5.03e+07
107             CID          1       0    1                  1       1.08e+08
108             CID          1       0    1                  1       2.67e+08
109             CID          1       0    1                  1       1.23e+08
110             CID          1       0    1                  1       2.04e+08
111             CID          1       0    1                  1       2.43e+06
112             CID          1       0    1                  1       1.61e+07
113             CID          1       0    1                  1       2.56e+07
114             CID          1       0    1                  1       5.68e+08
115             CID          1       0    1                  1       3.53e+08
116             CID          1       0    1                  1       2.41e+08
117             CID          1       0    1                  1       3.28e+07
118             CID          1       0    1                  1       5.32e+08
119             CID          1       0    1                  1       2.81e+08
120             CID          1       0    1                  1       2.22e+08
121             CID          1       0    1                  1       7.97e+06
122             CID          1       0    1                  1       2.19e+08
123             CID          1       0    1                  1       1.19e+08
124             CID          1       0    1                  1       1.23e+07
125             CID          1       0    1                  1       5.95e+08
126             CID          1       0    1                  1       3.40e+08
127             CID          1       0    1                  1       2.67e+08
128             CID          1       0    1                  1       5.18e+07
129             CID          1       0    1                  1       2.59e+07
130             CID          1       0    1                  1       3.34e+07
131             CID          1       0    1                  1       5.40e+08
132             CID          1       0    1                  1       2.79e+08
133             CID          1       0    1                  1       1.97e+08
134             CID          1       0    1                  1       1.97e+08
135             CID          1       0    1                  1       4.31e+07
136             CID          1       0    1                  1       9.55e+07
137             CID          1       0    1                  1       2.07e+05
138             CID          1       0    1                  1       2.70e+08
139             CID          1       0    1                  1       1.25e+08
140             CID          1       0    1                  1       2.36e+08
141             CID          1       0    1                  1       1.72e+07
142             CID          1       0    1                  1       1.72e+07
143             CID          1       0    1                  1       3.36e+07
144             CID          1       0    1                  1       4.87e+08
145             CID          1       0    1                  1       2.93e+08
146             CID          1       0    1                  1       1.95e+07
147             CID          1       0    1                  1       4.00e+07
148             CID          1       0    1                  1       5.40e+08
149             CID          1       0    1                  1       2.77e+08
150             CID          1       0    1                  1       2.21e+08
151             CID          1       0    1                  1       2.21e+08
152             CID          1       0    1                  1       1.25e+08
153             CID          1       0    1                  1       1.57e+07
154             CID          1       0    1                  1       1.00e+08
155             CID          1       0    1                  1       5.51e+08
156             CID          1       0    1                  1       6.69e+07
157             CID          1       0    1                  1       2.84e+08
158             CID          1       0    1                  1       1.11e+08
159             CID          1       0    1                  1       3.94e+07
160             CID          1       0    1                  1       4.12e+07
161             CID          1       0    1                  1       2.92e+08
162             CID          1       0    1                  1       5.29e+08
163             CID          1       0    1                  1       5.47e+07
164             CID          1       0    1                  1       1.91e+08
165             CID          1       0    1                  1       2.63e+05
166             CID          1       0    1                  1       3.48e+08
167             CID          1       0    1                  1       2.79e+08
168             CID          1       0    1                  1       1.03e+08
169             CID          1       0    1                  1       1.82e+08
170             CID          1       0    1                  1       1.43e+07
171             CID          1       0    1                  1       3.90e+07
172             CID          1       0    1                  1       5.17e+08
173             CID          1       0    1                  1       2.97e+08
174             CID          1       0    1                  1       5.74e+07
175             CID          1       0    1                  1       2.67e+07
176             CID          1       0    1                  1       3.87e+07
177             CID          1       0    1                  1       5.28e+08
178             CID          1       0    1                  1       2.00e+08
179             CID          1       0    1                  1             NA
180             CID          1       0    1                  1       1.56e+07
181             CID          1       0    1                  1       1.68e+08
182             CID          1       0    1                  1       4.43e+06
183             CID          1       0    1                  1       4.43e+06
184             CID          1       0    1                  1       2.74e+07
185             CID          1       0    1                  1       1.53e+07
186             CID          1       0    1                  1       9.48e+07
187             CID          1       0    1                  1       4.73e+08
188             CID          1       0    1                  1       2.83e+07
189             CID          1       0    1                  1       1.93e+08
190             CID          1       0    1                  1       1.93e+08
191             CID          1       0    1                  1       3.49e+07
192             CID          1       0    1                  1       2.12e+07
193             CID          1       0    1                  1       2.39e+07
194             CID          1       0    1                  1       5.02e+08
195             CID          1       0    1                  1       2.40e+08
196             CID          1       0    1                  1       5.69e+07
197             CID          1       0    1                  1       1.95e+08
198             CID          1       0    1                  1       5.69e+07
199             CID          1       0    1                  1       1.22e+08
200             CID          1       0    1                  1       2.11e+08
201             CID          1       0    1                  1       5.76e+06
202             CID          1       0    1                  1       2.98e+07
203             CID          1       0    1                  1       1.52e+07
204             CID          1       0    1                  1       9.11e+07
205             CID          1       0    1                  1       5.07e+08
206             CID          1       0    1                  1       2.43e+07
207             CID          1       0    1                  1       1.44e+07
208             CID          1       0    1                  1       2.93e+08
209             CID          1       0    1                  1       2.17e+07
210             CID          1       0    1                  1       4.39e+07
211             CID          1       0    1                  1       3.91e+07
212             CID          1       0    1                  1       3.91e+07
213             CID          1       0    1                  1       5.69e+08
214             CID          1       0    1                  1       2.77e+08
215             CID          1       0    1                  1       1.95e+08
216             CID          1       0    1                  1             NA
217             CID          1       0    1                  1       1.25e+08
218             CID          1       0    1                  1       3.21e+06
219             CID          1       0    1                  1       1.65e+07
220             CID          1       0    1                  1       3.01e+07
221             CID          1       0    1                  1       9.80e+07
222             CID          1       0    1                  1       5.16e+08
223             CID          1       0    1                  1       2.22e+07
224             CID          1       0    1                  1       6.19e+07
225             CID          1       0    1                  1       2.98e+08
226             CID          1       0    1                  1       4.55e+07
227             CID          1       0    1                  1       3.43e+07
228             CID          1       0    1                  1       5.83e+08
229             CID          1       0    1                  1       2.84e+08
230             CID          1       0    1                  1       2.16e+08
231             CID          1       0    1                  1       5.59e+07
232             CID          1       0    1                  1       3.88e+05
233             CID          1       0    1                  1       2.25e+07
234             CID          1       0    1                  1       1.97e+08
235             CID          1       0    1                  1       1.12e+08
236             CID          1       0    1                  1       1.35e+07
237             CID          1       0    1                  1       1.35e+07
238             CID          1       0    1                  1       9.15e+07
239             CID          1       0    1                  1       4.83e+08
240             CID          1       0    1                  1       2.61e+08
241             CID          1       0    1                  1       5.28e+07
242             CID          1       0    1                  1       2.65e+07
243             CID          1       0    1                  1       3.60e+07
244             CID          1       0    1                  1       3.60e+07
245             CID          1       0    1                  1       5.70e+08
246             CID          1       0    1                  1       2.03e+08
247             CID          1       0    1                  1       5.63e+07
    QuanResultID Decoy.Peptides.Matched Exp.Value Homology.Threshold
1             NA                     NA   2.7e-01                 13
2             NA                     NA   8.4e-05                 13
3             NA                     NA   6.6e-03                 13
4             NA                     NA   4.5e-04                 13
5             NA                     NA   3.8e-02                 13
6             NA                     NA   1.4e-06                 13
7             NA                     NA   2.3e-06                 13
8             NA                     NA   2.6e-02                 13
9             NA                     NA   4.1e-09                 13
10            NA                     NA   1.0e-04                 13
11            NA                     NA   2.6e-03                 13
12            NA                     NA   1.1e-07                 13
13            NA                     NA   8.6e-03                 13
14            NA                     NA   8.8e-02                 13
15            NA                     NA   8.5e-01                 13
16            NA                     NA   9.6e-05                 13
17            NA                     NA   2.4e-02                 13
18            NA                     NA   1.4e-01                 13
19            NA                     NA   2.0e-06                 13
20            NA                     NA   1.1e-01                 13
21            NA                     NA   8.6e-03                 13
22            NA                     NA   9.0e-07                 13
23            NA                     NA   2.5e-01                 13
24            NA                     NA   2.5e-09                 13
25            NA                     NA   1.4e-07                 13
26            NA                     NA   9.7e-01                 13
27            NA                     NA   7.4e-04                 13
28            NA                     19   5.1e-03                 13
29            NA                     14   4.5e-02                 13
30            NA                     NA   9.2e-07                 13
31            NA                     NA   3.1e-02                 13
32            NA                     NA   7.4e-03                 13
33            NA                     NA   9.6e-04                 13
34            NA                     NA   5.2e-02                 13
35            NA                      7   6.1e-01                 13
36            NA                     NA   1.2e-04                 13
37            NA                     NA   2.5e-01                 13
38            NA                     NA   6.3e-06                 13
39            NA                     NA   4.5e-02                 13
40            NA                     NA   1.1e-04                 13
41            NA                     NA   3.7e-06                 13
42            NA                     NA   3.1e-02                 13
43            NA                     NA   4.0e-09                 13
44            NA                     NA   2.8e-03                 13
45            NA                     NA   9.3e-04                 13
46            NA                     NA   7.3e-02                 13
47            NA                     NA   6.9e-03                 13
48            NA                     NA   2.2e-08                 13
49            NA                     NA   2.8e-03                 13
50            NA                     NA   8.3e-03                 13
51            NA                     NA   1.8e-01                 13
52            NA                      7   6.0e-01                 13
53            NA                     14   3.2e-01                 13
54            NA                     NA   7.3e-02                 13
55            NA                     NA   3.6e-04                 13
56            NA                     NA   3.4e-07                 13
57            NA                     NA   1.2e-02                 13
58            NA                     NA   1.3e-02                 13
59            NA                     NA   9.2e-06                 13
60            NA                     NA   4.4e-02                 13
61            NA                     NA   3.0e-06                 13
62            NA                     NA   2.8e-07                 13
63            NA                     NA   3.9e-03                 13
64            NA                     NA   7.0e-06                 13
65            NA                     NA   2.9e-03                 13
66            NA                     NA   1.2e-02                 13
67            NA                     NA   8.2e-07                 13
68            NA                     NA   3.2e-03                 13
69            NA                     NA   4.2e-04                 13
70            NA                     NA   6.5e-02                 13
71            NA                     NA   9.5e-02                 13
72            NA                     NA   1.7e-04                 13
73            NA                     NA   2.0e-01                 13
74            NA                     NA   2.9e-06                 13
75            NA                     NA   2.7e-01                 13
76            NA                     NA   1.8e-03                 13
77            NA                     NA   9.5e-05                 13
78            NA                     NA   6.8e-03                 13
79            NA                     NA   1.0e-02                 13
80            NA                     NA   4.6e-06                 13
81            NA                     NA   6.1e-07                 13
82            NA                     NA   1.3e-03                 13
83            NA                     NA   4.0e-03                 13
84            NA                     NA   2.6e-07                 13
85            NA                     NA   9.1e-03                 13
86            NA                     NA   3.0e-01                 13
87            NA                     NA   8.1e-02                 13
88            NA                     NA   1.0e-04                 13
89            NA                     NA   1.6e-02                 13
90            NA                     NA   1.7e-06                 13
91            NA                     NA   9.7e-05                 13
92            NA                     NA   1.7e-01                 13
93            NA                     NA   1.3e-02                 13
94            NA                     NA   8.1e-08                 13
95            NA                     NA   2.1e-02                 13
96            NA                     NA   3.2e-01                 13
97            NA                     NA   8.9e-04                 13
98            NA                     NA   4.5e-09                 13
99            NA                     NA   1.8e-01                 13
100           NA                     NA   5.4e-03                 13
101           NA                     NA   9.6e-03                 13
102           NA                     NA   4.4e-05                 13
103           NA                     NA   9.3e-03                 13
104           NA                     NA   1.2e-02                 13
105           NA                     NA   9.5e-02                 13
106           NA                     NA   9.1e-02                 13
107           NA                     14   3.0e-01                 13
108           NA                     NA   1.0e-04                 13
109           NA                     NA   2.5e-02                 13
110           NA                     NA   8.1e-06                 13
111           NA                     NA   1.7e-02                 13
112           NA                     NA   4.2e-03                 13
113           NA                     NA   1.2e-01                 13
114           NA                     NA   2.8e-05                 13
115           NA                     NA   3.3e-01                 13
116           NA                     NA   9.9e-08                 13
117           NA                     NA   6.6e-05                 13
118           NA                     NA   2.2e-03                 13
119           NA                     NA   1.5e-07                 13
120           NA                     NA   1.2e-03                 13
121           NA                      7   6.2e-01                 13
122           NA                     NA   1.0e-04                 13
123           NA                     NA   7.4e-02                 13
124           NA                     NA   1.9e-05                 13
125           NA                     NA   3.3e-07                 13
126           NA                     NA   2.8e-03                 13
127           NA                     NA   1.4e-08                 13
128           NA                     NA   1.8e-02                 13
129           NA                     NA   1.0e-02                 13
130           NA                     NA   9.8e-04                 13
131           NA                     NA   6.9e-03                 13
132           NA                     NA   1.2e-06                 13
133           NA                     NA   1.5e-04                 13
134           NA                     NA   1.4e-02                 13
135           NA                     NA   6.4e-03                 13
136           NA                     NA   6.7e-01                 13
137           NA                     NA   1.5e-02                 13
138           NA                     NA   2.0e-05                 13
139           NA                     NA   9.5e-02                 13
140           NA                     NA   1.0e-05                 13
141           NA                     NA   6.3e-06                 13
142           NA                     NA   3.5e-06                 13
143           NA                     NA   9.8e-02                 13
144           NA                     NA   6.6e-07                 13
145           NA                     NA   1.2e-07                 13
146           NA                     NA   6.9e-07                 13
147           NA                     NA   8.8e-04                 13
148           NA                     14   2.1e-02                 13
149           NA                     13   5.1e-06                 13
150           NA                     NA   7.1e-04                 13
151           NA                     NA   2.7e-02                 13
152           NA                     NA   5.7e-02                 13
153           NA                     NA   6.2e-04                 13
154           NA                     NA   8.7e-04                 13
155           NA                     NA   3.9e-05                 13
156           NA                     NA   1.1e-03                 13
157           NA                     NA   2.6e-07                 13
158           NA                     NA   1.2e-02                 13
159           NA                     NA   3.1e-02                 13
160           NA                     NA   3.6e-03                 13
161           NA                     NA   5.9e-08                 13
162           NA                     NA   2.9e-02                 13
163           NA                     NA   1.8e-01                 13
164           NA                     NA   2.0e-03                 13
165           NA                     NA   1.6e-02                 13
166           NA                     NA   7.6e-02                 13
167           NA                     NA   5.5e-05                 13
168           NA                     NA   8.1e-02                 13
169           NA                     NA   1.7e-06                 13
170           NA                     NA   1.9e-06                 13
171           NA                     NA   2.9e-02                 13
172           NA                     NA   2.9e-06                 13
173           NA                     NA   6.4e-06                 13
174           NA                     NA   8.6e-04                 13
175           NA                     NA   7.8e-06                 13
176           NA                     NA   1.5e-02                 13
177           NA                     NA   4.3e-04                 13
178           NA                     NA   2.9e-03                 13
179           NA                     13   4.3e-02                 13
180           NA                     NA   1.7e-02                 13
181           NA                     NA   3.7e-05                 13
182           NA                     NA   5.2e-02                 13
183           NA                     NA   4.6e-03                 13
184           NA                     NA   9.8e-02                 13
185           NA                     NA   4.6e-06                 13
186           NA                     NA   1.7e-02                 13
187           NA                     NA   1.3e-07                 13
188           NA                     NA   3.8e-04                 13
189           NA                     NA   1.5e-05                 13
190           NA                     NA   6.9e-07                 13
191           NA                     NA   1.2e-02                 13
192           NA                     NA   9.3e-05                 13
193           NA                     NA   2.5e-01                 13
194           NA                     NA   2.3e-02                 13
195           NA                     NA   1.1e-07                 13
196           NA                     NA   8.3e-01                 13
197           NA                     NA   6.2e-03                 13
198           NA                     NA   1.5e-01                 13
199           NA                     NA   2.4e-01                 13
200           NA                     NA   3.1e-06                 13
201           NA                     NA   2.7e-03                 13
202           NA                     NA   1.0e-01                 13
203           NA                     NA   1.3e-06                 13
204           NA                     NA   8.3e-04                 13
205           NA                     NA   1.1e-07                 13
206           NA                     NA   2.7e-04                 13
207           NA                     NA   1.6e-01                 13
208           NA                     NA   2.5e-07                 13
209           NA                     NA   6.5e-06                 13
210           NA                     NA   3.0e-02                 13
211           NA                     NA   9.9e-03                 13
212           NA                     NA   1.1e-03                 13
213           NA                     NA   1.6e-02                 13
214           NA                     NA   4.6e-07                 13
215           NA                     NA   1.1e-01                 13
216           NA                     NA   5.5e-01                 13
217           NA                     NA   5.0e-02                 13
218           NA                     NA   8.6e-03                 13
219           NA                     NA   2.6e-05                 13
220           NA                     NA   4.0e-01                 13
221           NA                     NA   4.5e-03                 13
222           NA                     NA   1.2e-06                 13
223           NA                     NA   5.3e-05                 13
224           NA                     NA   7.6e-05                 13
225           NA                     NA   9.0e-08                 13
226           NA                     NA   9.6e-02                 13
227           NA                     NA   8.2e-05                 13
228           NA                     14   1.1e-02                 13
229           NA                     NA   3.4e-06                 13
230           NA                     NA   1.8e-02                 13
231           NA                     NA   2.3e-01                 13
232           NA                     NA   1.0e-02                 13
233           NA                     NA   3.0e-03                 13
234           NA                     NA   2.7e-06                 13
235           NA                     NA   1.2e-02                 13
236           NA                     NA   1.1e-04                 13
237           NA                     NA   3.0e-06                 13
238           NA                     NA   7.2e-04                 13
239           NA                     NA   1.1e-06                 13
240           NA                     NA   6.7e-08                 13
241           NA                     NA   6.0e-01                 13
242           NA                     NA   1.1e-03                 13
243           NA                     NA   3.6e-03                 13
244           NA                     NA   3.1e-03                 13
245           NA                     15   3.9e-03                 13
246           NA                     NA   8.4e-03                 13
247           NA                     NA   7.7e-02                 13
    Identity.High Identity.Middle IonScore Peptides.Matched X..Missed.Cleavages
1              13              13       19                6                   0
2              13              13       54                9                   0
3              13              13       35               10                   0
4              13              13       46               10                   0
5              13              13       27                3                   0
6              13              13       72                4                   0
7              13              13       69                6                   0
8              13              13       29               22                   0
9              13              13       97               15                   0
10             13              13       53                6                   0
11             13              13       39               16                   1
12             13              13       83               14                   0
13             13              13       34               16                   0
14             13              13       24               16                   1
15             13              13       14               11                   1
16             13              13       53               10                   0
17             13              13       29               10                   0
18             13              13       21                3                   0
19             13              13       70                6                   0
20             13              13       23                6                   0
21             13              13       34                6                   0
22             13              13       73                6                   0
23             13              13       19               15                   0
24             13              13       99               17                   0
25             13              13       82                7                   0
26             13              13       13               12                   0
27             13              13       44               13                   1
28             13              13       36               15                   1
29             13              13       27               16                   0
30             13              13       73               17                   0
31             13              13       28               14                   1
32             13              13       34               16                   1
33             13              13       43               19                   0
34             13              13       26               19                   0
35             13              13       15                4                   0
36             13              13       52               11                   0
37             13              13       19               10                   0
38             13              13       65               10                   0
39             13              13       27                3                   0
40             13              13       53                3                   0
41             13              13       67                8                   0
42             13              13       28               18                   0
43             13              13       97               15                   0
44             13              13       39               15                   0
45             13              13       43               13                   0
46             13              13       24               14                   1
47             13              13       35               13                   0
48             13              13       90               14                   0
49             13              13       39               17                   1
50             13              13       34               16                   1
51             13              13       20               17                   1
52             13              13       15                4                   0
53             13              13       18               16                   0
54             13              13       24                8                   1
55             13              13       47               11                   0
56             13              13       78               10                   0
57             13              13       32               10                   0
58             13              13       32                3                   0
59             13              13       63                6                   0
60             13              13       27                6                   0
61             13              13       68                7                   0
62             13              13       79               15                   0
63             13              13       37               15                   0
64             13              13       65                6                   0
65             13              13       38               11                   1
66             13              13       32               13                   0
67             13              13       74               16                   0
68             13              13       38               14                   1
69             13              13       47               12                   1
70             13              13       25                7                   0
71             13              13       23               11                   1
72             13              13       51               10                   0
73             13              13       20               10                   0
74             13              13       68               10                   0
75             13              13       19                3                   0
76             13              13       40                3                   0
77             13              13       53                6                   0
78             13              13       35                6                   0
79             13              13       33                5                   0
80             13              13       66                8                   0
81             13              13       75               15                   0
82             13              13       42               15                   0
83             13              13       37               16                   0
84             13              13       79               14                   0
85             13              13       33               16                   1
86             13              13       18               16                   1
87             13              13       24               10                   0
88             13              13       53               11                   0
89             13              13       31               10                   0
90             13              13       71               10                   0
91             13              13       53                6                   0
92             13              13       21                6                   0
93             13              13       32                7                   0
94             13              13       84                7                   0
95             13              13       30               23                   0
96             13              13       18               15                   1
97             13              13       44               15                   0
98             13              13       97               15                   0
99             13              13       20               11                   0
100            13              13       36               11                   0
101            13              13       33               13                   0
102            13              13       57               17                   0
103            13              13       33               13                   1
104            13              13       32               12                   1
105            13              13       23               13                   1
106            13              13       23               21                   0
107            13              13       18               16                   0
108            13              13       53               11                   0
109            13              13       29               10                   0
110            13              13       64               10                   0
111            13              13       31                3                   0
112            13              13       37                4                   0
113            13              13       22                7                   0
114            13              13       59                8                   0
115            13              13       18               18                   0
116            13              13       83               15                   0
117            13              13       55               14                   1
118            13              13       40               13                   0
119            13              13       81               16                   0
120            13              13       42               17                   1
121            13              13       15                4                   0
122            13              13       53                9                   0
123            13              13       24               10                   0
124            13              13       60                4                   0
125            13              13       78                6                   0
126            13              13       39               20                   0
127            13              13       91               15                   0
128            13              13       31               13                   0
129            13              13       33                9                   1
130            13              13       43               18                   1
131            13              13       35               14                   0
132            13              13       72               16                   0
133            13              13       51               16                   1
134            13              13       32               16                   1
135            13              13       35               19                   0
136            13              13       15               16                   0
137            13              13       31                2                   0
138            13              13       60               10                   0
139            13              13       23               10                   0
140            13              13       63               10                   0
141            13              13       65                5                   0
142            13              13       68                6                   0
143            13              13       23                4                   0
144            13              13       75                6                   0
145            13              13       82               15                   0
146            13              13       75                5                   0
147            13              13       44               15                   1
148            13              13       30               15                   0
149            13              13       66               14                   0
150            13              13       44               16                   1
151            13              13       29               18                   1
152            13              13       25               10                   0
153            13              13       45                6                   0
154            13              13       44                5                   0
155            13              13       57                6                   0
156            13              13       43               15                   0
157            13              13       79               15                   0
158            13              13       32               13                   0
159            13              13       28               10                   1
160            13              13       37               13                   1
161            13              13       85               16                   0
162            13              13       28               14                   0
163            13              13       20               16                   1
164            13              13       40               18                   1
165            13              13       31                2                   0
166            13              13       24               11                   1
167            13              13       56                9                   0
168            13              13       24               10                   0
169            13              13       71               10                   0
170            13              13       70                6                   0
171            13              13       28                6                   0
172            13              13       68                6                   0
173            13              13       65               17                   0
174            13              13       44               17                   0
175            13              13       64                7                   0
176            13              13       31               19                   1
177            13              13       47               17                   0
178            13              13       38               19                   1
179            13              13       27               11                   0
180            13              13       31               11                   1
181            13              13       57               10                   0
182            13              13       26                3                   0
183            13              13       36                3                   0
184            13              13       23                6                   0
185            13              13       66                4                   0
186            13              13       31                6                   0
187            13              13       82                6                   0
188            13              13       47               20                   0
189            13              13       61               17                   0
190            13              13       75               17                   0
191            13              13       32               17                   0
192            13              13       53                7                   0
193            13              13       19               11                   1
194            13              13       29               15                   0
195            13              13       83               18                   0
196            13              13       14               16                   1
197            13              13       35               19                   1
198            13              13       21               20                   1
199            13              13       19               10                   0
200            13              13       68               10                   0
201            13              13       39                3                   0
202            13              13       23                6                   0
203            13              13       72                4                   0
204            13              13       44                5                   0
205            13              13       82                8                   0
206            13              13       49               19                   0
207            13              13       21               15                   1
208            13              13       79               15                   0
209            13              13       65                7                   0
210            13              13       28               14                   0
211            13              13       33               15                   1
212            13              13       43               16                   1
213            13              13       31               16                   0
214            13              13       76               17                   0
215            13              13       23               15                   1
216            13              13       16               19                   3
217            13              13       26               10                   0
218            13              13       34                3                   0
219            13              13       59                5                   0
220            13              13       17                6                   0
221            13              13       36                5                   0
222            13              13       72                8                   0
223            13              13       56               20                   0
224            13              13       54               15                   0
225            13              13       83               17                   0
226            13              13       23               11                   1
227            13              13       54               16                   1
228            13              13       33               16                   0
229            13              13       68               17                   0
230            13              13       30               17                   1
231            13              13       19               21                   1
232            13              13       33                2                   0
233            13              13       38               16                   1
234            13              13       69               10                   0
235            13              13       32               10                   0
236            13              13       53                6                   0
237            13              13       68                4                   0
238            13              13       44                5                   0
239            13              13       73                6                   0
240            13              13       85               17                   0
241            13              13       15               17                   0
242            13              13       43                7                   0
243            13              13       37               13                   1
244            13              13       38               15                   1
245            13              13       37               15                   0
246            13              13       34               18                   1
247            13              13       24               20                   1
    Isolation.Interference.... Ion.Inject.Time..ms. Intensity Charge  m.z..Da.
1                           53                    3   1590000      2  512.2952
2                           25                    0  17200000      2  610.8357
3                           64                    1   3100000      3  473.6051
4                           50                    3   2020000      2  709.9044
5                           29                   12    579000      2  734.8257
6                            5                    6    899000      2  747.8687
7                           35                    1  12000000      2  841.4786
8                           28                    2   3530000      2  844.4579
9                           19                    2   2700000      2  944.9767
10                           0                   19    579000      2 1075.9883
11                          29                    4    466000      4  649.8287
12                          24                    1   1660000      3  876.7622
13                           7                    1   3110000      4  657.8238
14                          24                    2    809000      4  721.6160
15                          27                    1   8500000      2  571.3293
16                          41                    0  13100000      2  610.8349
17                          27                    1   4180000      3  473.6052
18                          21                   35    183000      2  734.8257
19                          15                    8    643000      2  747.8672
20                          41                    3   1000000      3  498.9139
21                          21                   27    138000      2  747.8673
22                          46                    1   6160000      2  841.4785
23                          48                    5    671000      3  564.9766
24                           8                    1   3440000      2  944.9770
25                           0                    6   1070000      2 1075.9897
26                          40                    1   2850000      4  634.0680
27                           4                    3    594000      4  649.8274
28                          31                    5    484000      4  649.8279
29                          10                    2    793000      4  657.8238
30                          29                    2   1540000      3  876.7637
31                          56                    3    551000      4  721.6141
32                          41                    2    940000      4  721.6160
33                           0                    3   1180000      3 1012.8533
34                           3                    3    912000      3 1012.8550
35                          34                    5    740000      2  393.2599
36                          34                    1  10600000      2  610.8347
37                          85                    1   1800000      3  473.6045
38                          53                    2   2490000      2  709.9039
39                           0                   21    347000      2  734.8255
40                          38                   59    146000      2  734.8258
41                          39                    2   4020000      2  841.4780
42                          27                    1   5600000      2  844.4569
43                          17                    3   2010000      2  944.9758
44                          32                    3   1110000      3  630.3201
45                          37                    3    660000      3  845.0891
46                          34                    3    895000      4  649.8277
47                          12                    1   2480000      4  657.8231
48                          13                    1   4070000      3  876.7629
49                          32                    1   1500000      4  721.6157
50                          44                    2    501000      4  721.6157
51                          32                    4    469000      5  577.4944
52                          52                   16    363000      2  393.2593
53                          55                    2   2830000      2  425.7368
54                          18                    1  10500000      2  571.3284
55                          52                    1   4750000      2  610.8346
56                          33                    3   1500000      2  709.9030
57                          59                    1   4220000      3  473.6046
58                          53                   33    222000      2  734.8256
59                           0                   26    316000      2  747.8663
60                          28                    6    657000      3  498.9141
61                          39                    1   6030000      2  841.4772
62                          33                    5   1350000      2  944.9756
63                          35                    4    634000      3  630.3196
64                           0                   10    416000      2 1075.9887
65                          36                   11    347000      4  649.8269
66                           6                    1   2140000      4  657.8231
67                          19                    1   1660000      3  876.7628
68                          50                    3    164000      4  721.6141
69                          32                    4    647000      4  721.6148
70                          43                    3   1680000      2  512.2953
71                          14                    1  11800000      2  571.3287
72                          44                    1   7760000      2  610.8348
73                          76                    1   3770000      3  473.6048
74                          40                    2   2520000      2  709.9039
75                          60                   21    179000      3  490.2197
76                          26                   20    307000      2  734.8262
77                           4                    7    762000      2  747.8677
78                          14                    2   2140000      3  498.9145
79                          20                    2    972000      3  505.9196
80                          33                    1   5870000      2  841.4783
81                          11                    3   2520000      2  944.9763
82                          29                    2   1060000      3  630.3203
83                          20                    2    692000      4  657.8238
84                          22                    1   1590000      3  876.7633
85                          64                    2    908000      4  721.6156
86                          41                    3    924000      4  721.6158
87                          49                    2   2030000      2  514.3107
88                          38                    0  10500000      2  610.8347
89                          65                    1   4240000      3  473.6045
90                          48                    1   6710000      2  709.9031
91                          11                   11    568000      2  747.8676
92                          37                    3    604000      3  498.9144
93                           7                    1   3820000      3  505.9192
94                          39                    2   3720000      2  841.4776
95                          21                    1   7200000      2  844.4578
96                          79                    2    852000      2  930.4647
97                          27                    3   1370000      3  630.3195
98                          10                    2   2650000      2  944.9761
99                          27                    4   1020000      4  585.8293
100                         30                    3    970000      3  845.0876
101                          6                    0   6500000      4  657.8233
102                         34                    1   1150000      3  876.7642
103                         37                    2   1740000      4  721.6147
104                         48                    2    678000      4  721.6148
105                         13                    3    665000      5  577.4933
106                         11                    3   1190000      3 1012.8519
107                         53                    1   4180000      2  425.7365
108                         39                    0  11800000      2  610.8346
109                         54                    1   6510000      3  473.6048
110                         57                    3   1510000      2  709.9039
111                         52                   27    221000      2  734.8267
112                         54                   11    439000      2  747.8687
113                         30                    5    709000      3  498.9152
114                         43                    1   3570000      2  841.4778
115                         52                    3   1690000      2  844.4573
116                         26                    1   3650000      2  944.9755
117                         22                    5    313000      4  649.8276
118                          5                    0   6150000      4  657.8231
119                         36                    3    941000      3  876.7629
120                         34                    1   1640000      4  721.6157
121                         32                    9    442000      2  393.2601
122                         43                    0   9880000      2  610.8355
123                         54                    1   4930000      3  473.6049
124                          0                   12    476000      2  747.8684
125                         33                    1   5610000      2  841.4784
126                         30                    1   3890000      2  844.4583
127                         11                    3   1350000      2  944.9762
128                         52                    2   1520000      3  845.0891
129                          7                    2   2290000      3  850.4034
130                         20                    4    825000      4  649.8288
131                         13                    2   1490000      4  657.8241
132                          7                    1   3640000      3  876.7643
133                         52                    4    737000      4  721.6157
134                         31                    1   2080000      4  721.6161
135                          4                    5    784000      3 1012.8533
136                         54                    1   3400000      2  425.7370
137                         42                  100     10800      2  490.2122
138                         40                    0  11000000      2  610.8351
139                         74                    1   2690000      3  473.6049
140                         36                    3   2230000      2  709.9040
141                          0                   25    172000      2  747.8668
142                          0                   12    456000      2  747.8680
143                         11                    3    855000      3  498.9147
144                         25                    1   7420000      2  841.4788
145                         16                    1   3360000      2  944.9765
146                          8                    6   1280000      2 1075.9879
147                         16                    4    589000      4  649.8279
148                          4                    1   1880000      4  657.8240
149                         23                    2   1390000      3  876.7630
150                         46                    3    918000      4  721.6161
151                         58                    3    775000      4  721.6163
152                         75                    1   4140000      3  473.6054
153                          0                   11    583000      2  747.8680
154                         16                    2   1270000      3  505.9198
155                         33                    2   4790000      2  841.4785
156                         11                    2   1620000      3  630.3198
157                         13                    2   2840000      2  944.9769
158                         53                    1   2010000      4  634.0685
159                         20                    4    566000      3  850.4048
160                         20                    3         0      4  649.8273
161                         11                    1   3820000      3  876.7629
162                         11                    1   3860000      4  657.8241
163                         77                    3    953000      5  577.4939
164                         42                    2   1090000      4  721.6165
165                         72                  100     10900      2  490.2115
166                         23                    1  10000000      2  571.3293
167                         47                    0   8570000      2  610.8355
168                         61                    1   4100000      3  473.6049
169                         52                    5   1370000      2  709.9044
170                          0                   10    378000      2  747.8673
171                         34                    3   1110000      3  498.9142
172                         20                    1  11000000      2  841.4783
173                         12                    4   1030000      2  944.9771
174                         19                    2   1320000      3  630.3206
175                         21                    7    816000      2 1075.9888
176                          7                    3    683000      4  649.8290
177                         21                    2    709000      4  657.8248
178                         55                    3    619000      4  721.6171
179                         76                    4    622000      2  514.3116
180                         10                    4    755000      3  381.2227
181                         64                    2   2960000      2  709.9043
182                         34                   24    286000      2  734.8253
183                         26                   35    143000      2  734.8264
184                         52                    3    611000      3  498.9141
185                          0                    6   1030000      2  747.8687
186                         11                    3    847000      3  505.9201
187                         24                    1  11000000      2  841.4787
188                         17                    4   1290000      3  563.3089
189                         35                    4   1080000      2  944.9776
190                          2                    1   7570000      2  944.9778
191                         11                    2   2200000      3  630.3211
192                          0                    9    858000      2 1075.9902
193                         22                    3    912000      3  850.4055
194                          9                    0   3930000      4  657.8245
195                         32                    1   1450000      3  876.7649
196                         26                    3    301000      5  577.4939
197                         35                    2    929000      4  721.6168
198                         79                    2    931000      5  577.4952
199                         80                    1   4490000      3  473.6052
200                         39                    1   6870000      2  709.9042
201                         18                   16    321000      2  734.8260
202                         23                    3   1210000      3  498.9143
203                          0                    8    507000      2  747.8686
204                         24                    3    927000      3  505.9198
205                         14                    1  11100000      2  841.4781
206                         33                    4   1060000      3  563.3085
207                         41                    9    514000      2  930.4648
208                         12                    1   5970000      2  944.9753
209                         15                    9    664000      2 1075.9906
210                         38                    2    994000      3  845.0892
211                          0                    4    409000      4  649.8281
212                         10                    3    854000      4  649.8284
213                          6                    0   3900000      4  657.8238
214                         48                    2    552000      3  876.7639
215                         83                    1   3010000      4  721.6144
216                         30                    1    455000      4  762.8901
217                         78                    1   4570000      3  473.6052
218                         42                   29    241000      2  734.8259
219                          5                    5    807000      2  747.8670
220                         20                    3   1150000      3  498.9143
221                         59                    2   2410000      3  505.9197
222                         19                    1   6970000      2  841.4782
223                         19                    4   1410000      3  563.3082
224                          9                    2   1380000      3  630.3200
225                         17                    2   3840000      2  944.9773
226                          5                    2   1750000      3  850.4052
227                         29                    4    452000      4  649.8285
228                          5                    0   5410000      4  657.8240
229                         33                    1   1520000      3  876.7646
230                         24                    1   1930000      4  721.6157
231                         43                    2         0      5  577.4956
232                         40                  100      9360      2  490.2111
233                         17                    5    908000      3  381.2224
234                         43                    1   4640000      2  709.9045
235                         62                    0   6780000      3  473.6056
236                          0                   37    245000      2  747.8679
237                          0                    7    894000      2  747.8684
238                         10                    1   2890000      3  505.9197
239                         24                    1   4340000      2  841.4789
240                         30                    3   1750000      2  944.9770
241                          4                    2   1070000      3  630.3206
242                          0                    5    911000      2 1075.9899
243                         40                    5    265000      4  649.8274
244                         26                    4    759000      4  649.8283
245                         14                    1   2210000      4  657.8244
246                         21                    1   1440000      4  721.6163
247                         45                    3    480000      5  577.4954
     MH...Da. Delta.Mass..Da. Delta.Mass..PPM. RT..min. First.Scan Last.Scan
1   1023.5832               0            -0.17    48.61      14971     14971
2   1220.6642               0             0.67    45.31      13599     13599
3   1418.8008               0             0.35    58.58      19004     19004
4   1418.8016               0             0.92    58.53      18981     18981
5   1468.6441               0            -0.74    23.52       4707      4707
6   1494.7300               0             0.27    26.05       5657      5657
7   1681.9499               0             0.88    70.14      23636     23636
8   1687.9085               0            -0.21    87.41      30460     30460
9   1888.9461               0             1.09    79.76      27444     27444
10  2150.9693               0            -0.33    53.96      17148     17148
11  2596.2931               0             2.53   104.75      37260     37260
12  2628.2721               0             0.83    92.12      32309     32309
13  2628.2736               0             1.41    92.07      32289     32289
14  2883.4420               0             0.91    83.97      29106     29106
15  1141.6513               0             0.18    45.22      13545     13545
16  1220.6625               0            -0.73    45.78      13775     13775
17  1418.8011               0             0.61    59.06      19167     19167
18  1468.6441               0            -0.74    23.84       4886      4886
19  1494.7271               0            -1.69    26.41       5820      5820
20  1494.7273               0            -1.57    26.41       5816      5816
21  1494.7273               0            -1.52    26.53       5863      5863
22  1681.9497               0             0.81    70.33      23678     23678
23  1692.9151               0             0.52    76.38      26068     26068
24  1888.9468               0             1.48    80.24      27584     27584
25  2150.9722               0             1.04    54.37      17284     17284
26  2533.2501               0            -0.13    63.19      20833     20833
27  2596.2880               0             0.56   105.03      37313     37313
28  2596.2899               0             1.31   104.97      37290     37290
29  2628.2736               0             1.41    92.33      32338     32338
30  2628.2765               0             2.51    92.37      32354     32354
31  2883.4345               0            -1.72    85.16      29525     29525
32  2883.4423               0             0.99    84.89      29418     29418
33  3036.5454               0            -0.20    68.11      22790     22790
34  3036.5506               0             1.49    68.16      22810     22810
35   785.5126               0            -0.77    54.72      17769     17769
36  1220.6620               0            -1.13    45.80      14118     14118
37  1418.7989               0            -0.94    59.02      19491     19491
38  1418.8006               0             0.23    59.02      19494     19494
39  1468.6437               0            -0.99    23.20       4945      4945
40  1468.6443               0            -0.57    23.16       4927      4927
41  1681.9488               0             0.23    70.39      24051     24051
42  1687.9065               0            -1.37    87.84      30913     30913
43  1888.9444               0             0.19    80.16      27902     27902
44  1888.9456               0             0.86    80.27      27946     27946
45  2533.2526               0             0.84    63.04      21116     21116
46  2596.2890               0             0.93   105.18      37702     37702
47  2628.2706               0             0.29    92.50      32739     32739
48  2628.2743               0             1.67    92.60      32782     32782
49  2883.4408               0             0.49    85.01      29803     29803
50  2883.4411               0             0.57    84.95      29781     29781
51  2883.4428               0             1.18    85.08      29835     29835
52   785.5113               0            -2.40    54.48      17109     17109
53   850.4663               0            -0.76    36.60       9785      9785
54  1141.6495               0            -1.42    44.89      13193     13193
55  1220.6619               0            -1.23    45.56      13468     13468
56  1418.7987               0            -1.06    58.79      18844     18844
57  1418.7992               0            -0.75    58.93      18896     18896
58  1468.6438               0            -0.90    22.93       4292      4292
59  1494.7254               0            -2.83    25.60       5270      5270
60  1494.7277               0            -1.27    25.53       5246      5246
61  1681.9472               0            -0.71    70.13      23389     23389
62  1888.9440               0            -0.01    79.91      27238     27238
63  1888.9444               0             0.18    79.96      27259     27259
64  2150.9700               0             0.02    54.38      17068     17068
65  2596.2858               0            -0.29   104.90      37002     37002
66  2628.2706               0             0.29    92.27      32075     32075
67  2628.2737               0             1.46    92.32      32096     32096
68  2883.4345               0            -1.72    84.72      29124     29124
69  2883.4374               0            -0.70    84.79      29153     29153
70  1023.5834               0             0.07    49.31      14679     14679
71  1141.6502               0            -0.78    45.23      12996     12996
72  1220.6624               0            -0.83    45.89      13269     13269
73  1418.7997               0            -0.36    59.24      18705     18705
74  1418.8005               0             0.14    59.14      18666     18666
75  1468.6444               0            -0.50    24.48       4541      4541
76  1468.6451               0            -0.07    24.52       4558      4558
77  1494.7281               0            -1.03    26.85       5419      5419
78  1494.7288               0            -0.53    26.83       5410      5410
79  1515.7444               0             0.33    59.31      18733     18733
80  1681.9493               0             0.52    70.43      23192     23192
81  1888.9452               0             0.64    80.34      27107     27107
82  1888.9464               0             1.25    80.41      27138     27138
83  2628.2733               0             1.32    92.54      31912     31912
84  2628.2754               0             2.09    92.59      31929     31929
85  2883.4406               0             0.40    85.14      29006     29006
86  2883.4413               0             0.66    85.40      29106     29106
87  1027.6142               0            -0.47    54.96      17288     17288
88  1220.6622               0            -1.03    45.74      13514     13514
89  1418.7988               0            -1.01    59.45      19094     19094
90  1418.7990               0            -0.89    59.44      19092     19092
91  1494.7278               0            -1.20    25.83       5304      5304
92  1494.7286               0            -0.66    25.87       5317      5317
93  1515.7430               0            -0.57    59.50      19115     19115
94  1681.9479               0            -0.28    70.80      23647     23647
95  1687.9084               0            -0.29    88.47      30614     30614
96  1859.9222               0             0.31    62.94      20509     20509
97  1888.9438               0            -0.11    80.69      27559     27559
98  1888.9450               0             0.51    80.64      27536     27536
99  2340.2953               0             1.29    75.50      25509     25509
100 2533.2482               0            -0.90    63.35      20673     20673
101 2628.2714               0             0.57    93.23      32484     32484
102 2628.2781               0             3.13    93.18      32463     32463
103 2883.4369               0            -0.87    85.71      29533     29533
104 2883.4374               0            -0.70    85.97      29633     29633
105 2883.4376               0            -0.62    85.88      29598     29598
106 3036.5410               0            -1.65    68.52      22736     22736
107  850.4658               0            -1.33    37.07      10423     10423
108 1220.6619               0            -1.23    46.04      14103     14103
109 1418.7998               0            -0.30    59.45      19570     19570
110 1418.8006               0             0.23    59.36      19535     19535
111 1468.6460               0             0.59    23.36       4895      4895
112 1494.7300               0             0.27    25.98       5879      5879
113 1494.7311               0             1.00    26.05       5902      5902
114 1681.9484               0             0.01    70.82      24135     24135
115 1687.9073               0            -0.94    88.24      31002     31002
116 1888.9438               0            -0.14    80.37      27909     27909
117 2596.2885               0             0.74   105.52      37788     37788
118 2628.2704               0             0.20    92.92      32842     32842
119 2628.2741               0             1.60    92.90      32835     32835
120 2883.4408               0             0.49    85.51      29928     29928
121  785.5129               0            -0.30    55.18      16887     16887
122 1220.6637               0             0.27    46.16      13198     13198
123 1418.8003               0             0.02    59.43      18595     18595
124 1494.7295               0            -0.05    27.34       5471      5471
125 1681.9496               0             0.74    70.63      23086     23086
126 1687.9092               0             0.22    88.16      29994     29994
127 1888.9451               0             0.57    80.23      26874     26874
128 2533.2528               0             0.91    63.29      20155     20155
129 2549.1958               0            -0.79    54.60      16652     16652
130 2596.2934               0             2.62   105.32      36743     36743
131 2628.2746               0             1.78    92.65      31762     31762
132 2628.2783               0             3.20    92.74      31799     31799
133 2883.4411               0             0.57    85.26      28855     28855
134 2883.4425               0             1.08    85.38      28903     28903
135 3036.5454               0            -0.20    68.29      22152     22152
136  850.4668               0            -0.19    36.90      10228     10228
137  979.4172               0             2.28    14.08       1987      1987
138 1220.6629               0            -0.43    45.79      13891     13891
139 1418.8001               0            -0.10    59.23      19374     19374
140 1418.8008               0             0.40    59.14      19337     19337
141 1494.7264               0            -2.18    25.96       5722      5722
142 1494.7287               0            -0.63    25.99       5729      5729
143 1494.7296               0            -0.04    26.02       5741      5741
144 1681.9502               0             1.10    70.70      23969     23969
145 1888.9457               0             0.90    80.28      27751     27751
146 2150.9686               0            -0.67    54.42      17441     17441
147 2596.2899               0             1.31   105.30      37590     37590
148 2628.2743               0             1.69    92.65      32618     32618
149 2628.2744               0             1.74    92.66      32623     32623
150 2883.4425               0             1.08    85.20      29690     29690
151 2883.4435               0             1.42    85.13      29665     29665
152 1418.8018               0             1.06    59.75      19377     19377
153 1494.7287               0            -0.63    26.50       5778      5778
154 1515.7448               0             0.58    59.77      19388     19388
155 1681.9497               0             0.81    70.85      23829     23829
156 1888.9447               0             0.37    80.94      27811     27811
157 1888.9466               0             1.35    80.82      27763     27763
158 2533.2523               0             0.74    63.54      20908     20908
159 2549.1998               0             0.80    55.05      17489     17489
160 2596.2875               0             0.37   105.74      37557     37557
161 2628.2741               0             1.60    93.13      32605     32605
162 2628.2746               0             1.78    93.08      32584     32584
163 2883.4404               0             0.33    85.90      29762     29762
164 2883.4440               0             1.59    85.78      29716     29716
165  979.4158               0             0.79    14.56       1751      1751
166 1141.6514               0             0.29    45.55      13261     13261
167 1220.6636               0             0.17    46.20      13528     13528
168 1418.8003               0             0.02    59.71      19018     19018
169 1418.8014               0             0.83    59.45      18911     18911
170 1494.7273               0            -1.52    26.58       5478      5478
171 1494.7279               0            -1.15    26.57       5473      5473
172 1681.9494               0             0.59    70.84      23481     23481
173 1888.9470               0             1.54    80.65      27361     27361
174 1888.9471               0             1.63    80.76      27401     27401
175 2150.9703               0             0.13    54.88      17081     17081
176 2596.2943               0             3.00   105.47      37129     37129
177 2628.2775               0             2.90    92.71      32109     32109
178 2883.4464               0             2.43    85.29      29190     29190
179 1027.6159               0             1.19    55.99      17565     17565
180 1141.6534               0             2.04    46.71      13775     13775
181 1418.8013               0             0.74    60.39      19326     19326
182 1468.6432               0            -1.32    24.48       4791      4791
183 1468.6454               0             0.18    24.46       4781      4781
184 1494.7278               0            -1.21    27.20       5794      5794
185 1494.7302               0             0.35    27.10       5753      5753
186 1515.7457               0             1.18    60.46      19357     19357
187 1681.9501               0             1.03    71.37      23727     23727
188 1687.9121               0             1.95    89.07      30692     30692
189 1888.9479               0             2.06    81.42      27686     27686
190 1888.9483               0             2.25    81.57      27743     27743
191 1888.9488               0             2.51    81.59      27755     27755
192 2150.9732               0             1.49    55.60      17402     17402
193 2549.2018               0             1.59    55.69      17439     17439
194 2628.2760               0             2.34    93.68      32505     32505
195 2628.2801               0             3.90    93.64      32488     32488
196 2883.4404               0             0.33    86.83      29813     29813
197 2883.4455               0             2.09    86.71      29762     29762
198 2883.4468               0             2.56    86.88      29829     29829
199 1418.8011               0             0.61    59.75      18983     18983
200 1418.8012               0             0.66    59.75      18984     18984
201 1468.6447               0            -0.32    24.19       4544      4544
202 1494.7284               0            -0.84    26.94       5542      5542
203 1494.7299               0             0.19    26.86       5514      5514
204 1515.7448               0             0.58    59.78      18999     18999
205 1681.9489               0             0.30    71.01      23497     23497
206 1687.9109               0             1.19    88.55      30421     30421
207 1859.9224               0             0.45    63.58      20533     20533
208 1888.9434               0            -0.33    80.95      27426     27426
209 2150.9739               0             1.83    54.92      17044     17044
210 2533.2530               0             0.98    63.79      20614     20614
211 2596.2904               0             1.50   105.89      37225     37225
212 2596.2919               0             2.06   105.84      37203     37203
213 2628.2736               0             1.41    93.16      32234     32234
214 2628.2772               0             2.78    93.14      32229     32229
215 2883.4357               0            -1.29    85.91      29381     29381
216 3048.5385               0             0.97    70.71      23380     23380
217 1418.8009               0             0.48    59.72      19223     19223
218 1468.6445               0            -0.49    23.88       4720      4720
219 1494.7267               0            -1.93    26.48       5669      5669
220 1494.7284               0            -0.84    26.53       5691      5691
221 1515.7445               0             0.39    59.74      19231     19231
222 1681.9491               0             0.45    70.87      23685     23685
223 1687.9101               0             0.75    88.49      30624     30624
224 1888.9455               0             0.76    80.97      27671     27671
225 1888.9473               0             1.74    80.89      27638     27638
226 2549.2009               0             1.23    54.92      17297     17297
227 2596.2921               0             2.15   105.79      37414     37414
228 2628.2741               0             1.60    93.17      32462     32462
229 2628.2794               0             3.62    93.13      32448     32448
230 2883.4408               0             0.49    85.91      29608     29608
231 2883.4489               0             3.30    85.99      29644     29644
232  979.4150               0            -0.02    14.83       1752      1752
233 1141.6525               0             1.24    46.46      13293     13293
234 1418.8018               0             1.09    59.96      18776     18776
235 1418.8022               0             1.38    60.00      18792     18792
236 1494.7284               0            -0.79    27.27       5444      5444
237 1494.7295               0            -0.05    27.18       5406      5406
238 1515.7446               0             0.46    59.91      18757     18757
239 1681.9506               0             1.32    71.19      23265     23265
240 1888.9468               0             1.48    81.06      27157     27157
241 1888.9471               0             1.63    81.28      27250     27250
242 2150.9725               0             1.15    55.05      16806     16806
243 2596.2877               0             0.46   105.83      36885     36885
244 2596.2912               0             1.78   105.87      36901     36901
245 2628.2758               0             2.25    93.33      31981     31981
246 2883.4435               0             1.42    86.06      29122     29122
247 2883.4480               0             2.98    86.04      29116     29116
    MS.Order Ions.Matched Matched.Ions Total.Ions
1        MS2       Jun-74            6         74
2        MS2       Sep-98            9         98
3        MS2        8/128            8        128
4        MS2       14/128           14        128
5        MS2        8/112            8        112
6        MS2       11/160           11        160
7        MS2        9/170            9        170
8        MS2        9/126            9        126
9        MS2       10/156           10        156
10       MS2        9/194            9        194
11       MS2        9/220            9        220
12       MS2       29/224           29        224
13       MS2       17/224           17        224
14       MS2       18/288           18        288
15       MS2       Aug-80            8         80
16       MS2       Jul-98            7         98
17       MS2       12/128           12        128
18       MS2        8/112            8        112
19       MS2       10/160           10        160
20       MS2        8/160            8        160
21       MS2        9/160            9        160
22       MS2       11/170           11        170
23       MS2       11/150           11        150
24       MS2       11/156           11        156
25       MS2        9/194            9        194
26       MS2       12/238           12        238
27       MS2        9/220            9        220
28       MS2       20/220           20        220
29       MS2       13/224           13        224
30       MS2       26/224           26        224
31       MS2       16/288           16        288
32       MS2       20/288           20        288
33       MS2       25/298           25        298
34       MS2       21/298           21        298
35       MS2       Mar-48            3         48
36       MS2       Sep-98            9         98
37       MS2        4/128            4        128
38       MS2       10/128           10        128
39       MS2       10/112           10        112
40       MS2        9/112            9        112
41       MS2       10/170           10        170
42       MS2        9/126            9        126
43       MS2       10/156           10        156
44       MS2       16/156           16        156
45       MS2       13/238           13        238
46       MS2       13/220           13        220
47       MS2       18/224           18        224
48       MS2       26/224           26        224
49       MS2       22/288           22        288
50       MS2       20/288           20        288
51       MS2       20/288           20        288
52       MS2       Aug-48            8         48
53       MS2       Jun-64            6         64
54       MS2       May-80            5         80
55       MS2       Jul-98            7         98
56       MS2       15/128           15        128
57       MS2        6/128            6        128
58       MS2        9/112            9        112
59       MS2       11/160           11        160
60       MS2       11/160           11        160
61       MS2       12/170           12        170
62       MS2       10/156           10        156
63       MS2        6/156            6        156
64       MS2       11/194           11        194
65       MS2       13/220           13        220
66       MS2       20/224           20        224
67       MS2       22/224           22        224
68       MS2       22/288           22        288
69       MS2       26/288           26        288
70       MS2       Aug-74            8         74
71       MS2       Jul-80            7         80
72       MS2       Jul-98            7         98
73       MS2        4/128            4        128
74       MS2       15/128           15        128
75       MS2       11/112           11        112
76       MS2       12/112           12        112
77       MS2       10/160           10        160
78       MS2        7/160            7        160
79       MS2       15/132           15        132
80       MS2        9/170            9        170
81       MS2       10/156           10        156
82       MS2       12/156           12        156
83       MS2        8/224            8        224
84       MS2       24/224           24        224
85       MS2       20/288           20        288
86       MS2       19/288           19        288
87       MS2       May-80            5         80
88       MS2       Jul-98            7         98
89       MS2        8/128            8        128
90       MS2       15/128           15        128
91       MS2       10/160           10        160
92       MS2        4/160            4        160
93       MS2       11/132           11        132
94       MS2       13/170           13        170
95       MS2       23/126           23        126
96       MS2        9/178            9        178
97       MS2       10/156           10        156
98       MS2       10/156           10        156
99       MS2        9/208            9        208
100      MS2       22/238           22        238
101      MS2       17/224           17        224
102      MS2       25/224           25        224
103      MS2       25/288           25        288
104      MS2       21/288           21        288
105      MS2       18/288           18        288
106      MS2       11/298           11        298
107      MS2       May-64            5         64
108      MS2       Jul-98            7         98
109      MS2        6/128            6        128
110      MS2        9/128            9        128
111      MS2       13/112           13        112
112      MS2       19/160           19        160
113      MS2        7/160            7        160
114      MS2       11/170           11        170
115      MS2        7/126            7        126
116      MS2       10/156           10        156
117      MS2       20/220           20        220
118      MS2       10/224           10        224
119      MS2       26/224           26        224
120      MS2       27/288           27        288
121      MS2       Mar-48            3         48
122      MS2       Jul-98            7         98
123      MS2        6/128            6        128
124      MS2       10/160           10        160
125      MS2       11/170           11        170
126      MS2        8/126            8        126
127      MS2       10/156           10        156
128      MS2       10/238           10        238
129      MS2       18/228           18        228
130      MS2       17/220           17        220
131      MS2        9/224            9        224
132      MS2       29/224           29        224
133      MS2       26/288           26        288
134      MS2       17/288           17        288
135      MS2       13/298           13        298
136      MS2       May-64            5         64
137      MS2       Jul-66            7         66
138      MS2       Aug-98            8         98
139      MS2        6/128            6        128
140      MS2       14/128           14        128
141      MS2       11/160           11        160
142      MS2       11/160           11        160
143      MS2       10/160           10        160
144      MS2       13/170           13        170
145      MS2       10/156           10        156
146      MS2       11/194           11        194
147      MS2       19/220           19        220
148      MS2       17/224           17        224
149      MS2       15/224           15        224
150      MS2       26/288           26        288
151      MS2       20/288           20        288
152      MS2        6/128            6        128
153      MS2       10/160           10        160
154      MS2       15/132           15        132
155      MS2       13/170           13        170
156      MS2       10/156           10        156
157      MS2       10/156           10        156
158      MS2       19/238           19        238
159      MS2       11/228           11        228
160      MS2       21/220           21        220
161      MS2       28/224           28        224
162      MS2       21/224           21        224
163      MS2       14/288           14        288
164      MS2       22/288           22        288
165      MS2       Jul-66            7         66
166      MS2       May-80            5         80
167      MS2       Sep-98            9         98
168      MS2        6/128            6        128
169      MS2       15/128           15        128
170      MS2       11/160           11        160
171      MS2        9/160            9        160
172      MS2       10/170           10        170
173      MS2       12/156           12        156
174      MS2       12/156           12        156
175      MS2       11/194           11        194
176      MS2       24/220           24        220
177      MS2       16/224           16        224
178      MS2       21/288           21        288
179      MS2       May-80            5         80
180      MS2       Jun-80            6         80
181      MS2       14/128           14        128
182      MS2        8/112            8        112
183      MS2        9/112            9        112
184      MS2        9/160            9        160
185      MS2       10/160           10        160
186      MS2       10/132           10        132
187      MS2       10/170           10        170
188      MS2       14/126           14        126
189      MS2       10/156           10        156
190      MS2       11/156           11        156
191      MS2        7/156            7        156
192      MS2       12/194           12        194
193      MS2       10/228           10        228
194      MS2       21/224           21        224
195      MS2       25/224           25        224
196      MS2       10/288           10        288
197      MS2       23/288           23        288
198      MS2       12/288           12        288
199      MS2        4/128            4        128
200      MS2       15/128           15        128
201      MS2        9/112            9        112
202      MS2        8/160            8        160
203      MS2       11/160           11        160
204      MS2       16/132           16        132
205      MS2       12/170           12        170
206      MS2       13/126           13        126
207      MS2       10/178           10        178
208      MS2       10/156           10        156
209      MS2        8/194            8        194
210      MS2       22/238           22        238
211      MS2        9/220            9        220
212      MS2       10/220           10        220
213      MS2       11/224           11        224
214      MS2       27/224           27        224
215      MS2       19/288           19        288
216      MS2        6/296            6        296
217      MS2        6/128            6        128
218      MS2        9/112            9        112
219      MS2       10/160           10        160
220      MS2        7/160            7        160
221      MS2       17/132           17        132
222      MS2       11/170           11        170
223      MS2       12/126           12        126
224      MS2        7/156            7        156
225      MS2       19/156           19        156
226      MS2       14/228           14        228
227      MS2        9/220            9        220
228      MS2       10/224           10        224
229      MS2       28/224           28        224
230      MS2       19/288           19        288
231      MS2       16/288           16        288
232      MS2       Jul-66            7         66
233      MS2       May-80            5         80
234      MS2       15/128           15        128
235      MS2        6/128            6        128
236      MS2       10/160           10        160
237      MS2       10/160           10        160
238      MS2       10/132           10        132
239      MS2       12/170           12        170
240      MS2       11/156           11        156
241      MS2       10/156           10        156
242      MS2       11/194           11        194
243      MS2       20/220           20        220
244      MS2       20/220           20        220
245      MS2       17/224           17        224
246      MS2       24/288           24        288
247      MS2        6/288            6        288
                                      Spectrum.File Annotation
1   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
2   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
3   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
4   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
5   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
6   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
7   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
8   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
9   121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
10  121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
11  121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
12  121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
13  121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
14  121219_S_CCES_01_01_LysC_Try_1to10_Mixt_1_1.raw         NA
15  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
16  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
17  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
18  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
19  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
20  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
21  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
22  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
23  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
24  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
25  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
26  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
27  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
28  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
29  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
30  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
31  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
32  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
33  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
34  121219_S_CCES_01_02_LysC_Try_1to10_Mixt_1_2.raw         NA
35  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
36  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
37  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
38  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
39  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
40  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
41  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
42  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
43  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
44  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
45  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
46  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
47  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
48  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
49  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
50  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
51  121219_S_CCES_01_03_LysC_Try_1to10_Mixt_1_3.raw         NA
52  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
53  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
54  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
55  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
56  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
57  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
58  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
59  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
60  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
61  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
62  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
63  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
64  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
65  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
66  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
67  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
68  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
69  121219_S_CCES_01_04_LysC_Try_1to10_Mixt_2_1.raw         NA
70  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
71  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
72  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
73  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
74  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
75  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
76  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
77  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
78  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
79  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
80  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
81  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
82  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
83  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
84  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
85  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
86  121219_S_CCES_01_05_LysC_Try_1to10_Mixt_2_2.raw         NA
87  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
88  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
89  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
90  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
91  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
92  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
93  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
94  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
95  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
96  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
97  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
98  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
99  121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
100 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
101 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
102 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
103 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
104 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
105 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
106 121219_S_CCES_01_06_LysC_Try_1to10_Mixt_2_3.raw         NA
107 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
108 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
109 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
110 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
111 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
112 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
113 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
114 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
115 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
116 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
117 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
118 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
119 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
120 121219_S_CCES_01_07_LysC_Try_1to10_Mixt_3_1.raw         NA
121 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
122 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
123 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
124 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
125 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
126 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
127 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
128 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
129 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
130 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
131 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
132 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
133 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
134 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
135 121219_S_CCES_01_08_LysC_Try_1to10_Mixt_3_2.raw         NA
136 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
137 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
138 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
139 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
140 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
141 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
142 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
143 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
144 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
145 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
146 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
147 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
148 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
149 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
150 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
151 121219_S_CCES_01_09_LysC_Try_1to10_Mixt_3_3.raw         NA
152 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
153 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
154 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
155 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
156 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
157 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
158 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
159 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
160 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
161 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
162 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
163 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
164 121219_S_CCES_01_10_LysC_Try_1to10_Mixt_4_1.raw         NA
165 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
166 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
167 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
168 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
169 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
170 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
171 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
172 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
173 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
174 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
175 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
176 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
177 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
178 121219_S_CCES_01_11_LysC_Try_1to10_Mixt_4_2.raw         NA
179 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
180 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
181 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
182 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
183 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
184 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
185 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
186 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
187 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
188 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
189 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
190 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
191 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
192 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
193 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
194 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
195 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
196 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
197 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
198 121219_S_CCES_01_12_LysC_Try_1to10_Mixt_4_3.raw         NA
199 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
200 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
201 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
202 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
203 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
204 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
205 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
206 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
207 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
208 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
209 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
210 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
211 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
212 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
213 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
214 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
215 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
216 121219_S_CCES_01_13_LysC_Try_1to10_Mixt_5_1.raw         NA
217 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
218 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
219 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
220 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
221 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
222 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
223 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
224 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
225 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
226 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
227 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
228 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
229 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
230 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
231 121219_S_CCES_01_14_LysC_Try_1to10_Mixt_5_2.raw         NA
232 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
233 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
234 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
235 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
236 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
237 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
238 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
239 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
240 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
241 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
242 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
243 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
244 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
245 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
246 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
247 121219_S_CCES_01_15_LysC_Try_1to10_Mixt_5_3.raw         NA
INFO  [2024-12-24 09:08:27] ** Raw data from ProteomeDiscoverer imported successfully.
INFO  [2024-12-24 09:08:27] ** Raw data from ProteomeDiscoverer cleaned successfully.
INFO  [2024-12-24 09:08:27] ** Using provided annotation.
INFO  [2024-12-24 09:08:27] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:27] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge
  - Shared peptides will be removed.
  - Proteins with single feature will not be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:27] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:27] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:27] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:27] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Fractionation handled.
INFO  [2024-12-24 09:08:27] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:27] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is prog 
Reached in prog
INFO  [2024-12-24 09:08:27] ** Raw data from Progenesis imported successfully.
INFO  [2024-12-24 09:08:27] ** Raw data from Progenesis cleaned successfully.
INFO  [2024-12-24 09:08:27] ** Using provided annotation.
INFO  [2024-12-24 09:08:27] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:27] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:27] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:27] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:27] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:27] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:27] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:27] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:27] ** Fractionation handled.
INFO  [2024-12-24 09:08:27] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:27] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sky 
Reached here in skyline
INFO  [2024-12-24 09:08:28] ** Raw data from Skyline imported successfully.
INFO  [2024-12-24 09:08:28] ** Raw data from Skyline cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using annotation extracted from quantification data.
INFO  [2024-12-24 09:08:28] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: IsotopeLabelType, PeptideSequence, PrecursorCharge, FragmentIon, ProductCharge
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:28] ** Rows with values of StandardType equal to iRT are removed 
INFO  [2024-12-24 09:08:28] ** Intensities with values of Truncated equal to TRUE are replaced with NA
WARN  [2024-12-24 09:08:28] ** DetectionQValue not found in input columns.
INFO  [2024-12-24 09:08:28] ** Sequences containing DECOY, Decoys are removed.
INFO  [2024-12-24 09:08:28] ** Three isotopic preaks per feature and run are summed
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: sum
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:28] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Fractionation handled.
INFO  [2024-12-24 09:08:28] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:28] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
Reached in evidence
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File type is sky 
Reached here in skyline
INFO  [2024-12-24 09:08:28] ** Raw data from Skyline imported successfully.
INFO  [2024-12-24 09:08:28] ** Raw data from Skyline cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using annotation extracted from quantification data.
INFO  [2024-12-24 09:08:28] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: IsotopeLabelType, PeptideSequence, PrecursorCharge, FragmentIon, ProductCharge
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:28] ** Rows with values of StandardType equal to iRT are removed 
INFO  [2024-12-24 09:08:28] ** Intensities with values of Truncated equal to TRUE are replaced with NA
WARN  [2024-12-24 09:08:28] ** DetectionQValue not found in input columns.
INFO  [2024-12-24 09:08:28] ** Sequences containing DECOY, Decoys are removed.
INFO  [2024-12-24 09:08:28] ** Three isotopic preaks per feature and run are summed
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: sum
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:28] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Fractionation handled.
INFO  [2024-12-24 09:08:28] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:28] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
Reached in evidence
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File type is openms 
INFO  [2024-12-24 09:08:28] ** Raw data from OpenMS imported successfully.
INFO  [2024-12-24 09:08:28] ** Raw data from OpenMS cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using annotation extracted from quantification data.
INFO  [2024-12-24 09:08:28] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge, FragmentIon, ProductCharge
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:28] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Fractionation handled.
INFO  [2024-12-24 09:08:28] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:28] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
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File type is ump 
INFO  [2024-12-24 09:08:28] ** Raw data from DIAUmpire imported successfully.
INFO  [2024-12-24 09:08:28] ** Using selected fragments.
INFO  [2024-12-24 09:08:28] ** Extracted the data from selected fragments and/or peptides.
INFO  [2024-12-24 09:08:28] ** Raw data from DIAUmpire cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using provided annotation.
INFO  [2024-12-24 09:08:28] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, FragmentIon
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:28] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Fractionation handled.
INFO  [2024-12-24 09:08:28] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:28] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
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File type is spec 
INFO  [2024-12-24 09:08:28] ** Raw data from Spectronaut imported successfully.
INFO  [2024-12-24 09:08:28] ** Raw data from Spectronaut cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using annotation extracted from quantification data.
INFO  [2024-12-24 09:08:28] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge, FragmentIon, ProductCharge
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:28] ** Intensities with values not smaller than 0.01 in PGQvalue are replaced with NA
INFO  [2024-12-24 09:08:28] ** Intensities with values not smaller than 0.01 in EGQvalue are replaced with NA
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:28] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Fractionation handled.
INFO  [2024-12-24 09:08:28] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:28] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
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File type is open 
INFO  [2024-12-24 09:08:28] ** Raw data from OpenSWATH imported successfully.
INFO  [2024-12-24 09:08:28] ** Raw data from OpenSWATH cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using provided annotation.
INFO  [2024-12-24 09:08:28] ** Run labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge, FragmentIon
  - Shared peptides will be removed.
  - Proteins with a single feature will be removed.
  - Features with less than 3 measurements across runs will be removed.
INFO  [2024-12-24 09:08:28] ** Rows with values of decoy equal to 1 are removed 
INFO  [2024-12-24 09:08:28] ** Rows with values not smaller than 0.01 in m_score are removed 
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Multiple measurements in a feature and a run are summarized by summaryforMultipleRows: max
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] Proteins with a single feature are removed.
INFO  [2024-12-24 09:08:28] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:28] ** Fractionation handled.
INFO  [2024-12-24 09:08:28] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:28] ** Finished preprocessing. The dataset is ready to be processed by the dataProcess function.
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File type is maxq 
Reached in maxq
INFO  [2024-12-24 09:08:28] ** Raw data from MaxQuant imported successfully.
INFO  [2024-12-24 09:08:28] ** Rows with values of Potentialcontaminant equal to + are removed 
INFO  [2024-12-24 09:08:28] ** Rows with values of Reverse equal to + are removed 
INFO  [2024-12-24 09:08:28] ** Rows with values of Potentialcontaminant equal to + are removed 
INFO  [2024-12-24 09:08:28] ** Rows with values of Reverse equal to + are removed 
INFO  [2024-12-24 09:08:28] ** + Contaminant, + Reverse, + Potential.contaminant proteins are removed.
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:28] ** Raw data from MaxQuant cleaned successfully.
INFO  [2024-12-24 09:08:28] ** Using provided annotation.
INFO  [2024-12-24 09:08:28] ** Run and Channel labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:28] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge
  - Shared peptides will be removed.
  - Proteins with single feature will not be removed.
  - Features with less than 3 measurements within each run will be removed.
INFO  [2024-12-24 09:08:28] ** Features with all missing measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:28] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:28] ** Features with one or two measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** PSMs have been aggregated to peptide ions.
INFO  [2024-12-24 09:08:29] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:29] ** Features with one or two measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** Fractionation handled.
INFO  [2024-12-24 09:08:29] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:29] ** Finished preprocessing. The dataset is ready to be processed by the proteinSummarization function.
 [1] "ProteinName"     "PeptideSequence" "Charge"          "PSM"            
 [5] "Mixture"         "TechRepMixture"  "Run"             "Channel"        
 [9] "BioReplicate"    "Condition"       "Intensity"      
Reached in evidence
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File type is openms 
INFO  [2024-12-24 09:08:29] ** Raw data from OpenMS imported successfully.
INFO  [2024-12-24 09:08:29] ** Raw data from OpenMS cleaned successfully.
INFO  [2024-12-24 09:08:29] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge
  - Shared peptides will be removed.
  - Proteins with single feature will not be removed.
  - Features with less than 3 measurements within each run will be removed.
INFO  [2024-12-24 09:08:29] ** Features with all missing measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:29] ** Features with one or two measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** PSMs have been aggregated to peptide ions.
INFO  [2024-12-24 09:08:29] ** For peptides overlapped between fractions of 2_2_2 use the fraction with maximal average abundance.
INFO  [2024-12-24 09:08:29] ** For peptides overlapped between fractions of 3_3_3 use the fraction with maximal average abundance.
INFO  [2024-12-24 09:08:29] ** Fractions belonging to same mixture have been combined.
INFO  [2024-12-24 09:08:29] ** Features with one or two measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** Fractionation handled.
INFO  [2024-12-24 09:08:29] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:29] ** Finished preprocessing. The dataset is ready to be processed by the proteinSummarization function.
 [1] "ProteinName"     "PeptideSequence" "Charge"          "PSM"            
 [5] "Mixture"         "TechRepMixture"  "Run"             "Channel"        
 [9] "BioReplicate"    "Condition"       "Intensity"      
Reached in evidence
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File type is spmin 
INFO  [2024-12-24 09:08:29] ** Raw data from SpectroMine imported successfully.
INFO  [2024-12-24 09:08:29] ** Raw data from SpectroMine cleaned successfully.
INFO  [2024-12-24 09:08:29] ** Using provided annotation.
INFO  [2024-12-24 09:08:29] ** Run and Channel labels were standardized to remove symbols such as '.' or '%'.
INFO  [2024-12-24 09:08:29] ** The following options are used:
  - Features will be defined by the columns: PeptideSequence, PrecursorCharge
  - Shared peptides will be removed.
  - Proteins with single feature will not be removed.
  - Features with less than 3 measurements within each run will be removed.
INFO  [2024-12-24 09:08:29] ** Intensities with values not smaller than 0.01 in PGQValue are replaced with NA
INFO  [2024-12-24 09:08:29] ** Intensities with values not smaller than 0.01 in Qvalue are replaced with NA
INFO  [2024-12-24 09:08:29] ** Features with all missing measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** Shared peptides are removed.
INFO  [2024-12-24 09:08:29] ** Features with one or two measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** PSMs have been aggregated to peptide ions.
INFO  [2024-12-24 09:08:29] ** Run annotation merged with quantification data.
INFO  [2024-12-24 09:08:29] ** For peptides overlapped between fractions of 1_1 use the fraction with maximal average abundance.
INFO  [2024-12-24 09:08:29] ** Fractions belonging to same mixture have been combined.
INFO  [2024-12-24 09:08:29] ** Features with one or two measurements across channels within each run are removed.
INFO  [2024-12-24 09:08:29] ** Fractionation handled.
INFO  [2024-12-24 09:08:29] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:29] ** Finished preprocessing. The dataset is ready to be processed by the proteinSummarization function.
Reached here in skyline
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File type is sample 
[1] "+++++++++ In getSummary1 +++++++++"
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[1] "+++++++++ In getSummary1 +++++++++"
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File type is sample 
[1] "+++++++++ In getSummary1 +++++++++"
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File type is sample 
[1] "+++++++++ In getSummary2 +++++++++"
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File type is sample 
 [1] "Number of PTMs"             "Number of PTM Features"    
 [3] "Number of Features/PTM"     "PTM Intensity Range"       
 [5] "Number of Unmod Proteins"   "Number of Protein Peptides"
 [7] "Number of Protein Features" "Number of Features/Peptide"
 [9] "Number of Peptides/Protein" "Protein Intensity Range"   
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File type is sample 
[1] "+++++++++ In getSummary2 +++++++++"
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File type is sample 
 [1] "Number of PTMs"             "Number of PTM Features"    
 [3] "Number of Features/PTM"     "PTM Intensity Range"       
 [5] "Number of Unmod Proteins"   "Number of Protein Peptides"
 [7] "Number of Protein Features" "Number of Features/Peptide"
 [9] "Number of Peptides/Protein" "Protein Intensity Range"   
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File type is sample 
[1] "+++++++++ In getSummary2 +++++++++"
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File type is sample 
[1] "+++++++++ In preprocessData +++++++++"
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File type is sample 
INFO  [2024-12-24 09:08:30] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:30] ** Fractionation handled.
INFO  [2024-12-24 09:08:30] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:30] ** Use all features that the dataset originally has.
INFO  [2024-12-24 09:08:32] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:32] ** Fractionation handled.
INFO  [2024-12-24 09:08:32] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:32] ** Use all features that the dataset originally has.
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File type is sample 
[1] "+++++++++ In preprocessData +++++++++"
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File type is sample 
INFO  [2024-12-24 09:08:33] ** MSstatsTMT - proteinSummarization function
INFO  [2024-12-24 09:08:33] ** Use all features that the dataset originally has.
INFO  [2024-12-24 09:08:34] ** Use all features that the dataset originally has.
INFO  [2024-12-24 09:08:35] ** 'Norm' information in Condition is required for normalization. Please check it. At this moment, normalization is not performed.
INFO  [2024-12-24 09:08:35] ** MSstatsTMT - proteinSummarization function
INFO  [2024-12-24 09:08:35] ** Use all features that the dataset originally has.
INFO  [2024-12-24 09:08:36] ** Use all features that the dataset originally has.
INFO  [2024-12-24 09:08:39] ** 'Norm' information in Condition is required for normalization. Please check it. At this moment, normalization is not performed.
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File type is sample 
[1] "+++++++++ In preprocessData +++++++++"
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File type is sample 
INFO  [2024-12-24 09:08:39] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:39] ** Fractionation handled.
INFO  [2024-12-24 09:08:39] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:39] ** Use all features that the dataset originally has.
[1] "+++++++++ In Data Comparison +++++++++"
[1] "+++++++++ In preprocessData +++++++++"
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File type is sample 
INFO  [2024-12-24 09:08:39] ** MSstatsTMT - proteinSummarization function
INFO  [2024-12-24 09:08:39] ** 'Norm' information in Condition is required for normalization. Please check it. At this moment, normalization is not performed.
INFO  [2024-12-24 09:08:39] ** MSstatsTMT - proteinSummarization function
INFO  [2024-12-24 09:08:40] ** 'Norm' information in Condition is required for normalization. Please check it. At this moment, normalization is not performed.
INFO  [2024-12-24 09:08:40] Design: 2 mixtures.
INFO  [2024-12-24 09:08:40] Design: 1 MS run per mixture.
INFO  [2024-12-24 09:08:40] Design: group comparison design (Different conditions contains different biological subjects).
INFO  [2024-12-24 09:08:40] Model fitting for 90 proteins.

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INFO  [2024-12-24 09:08:43] Design: 2 mixtures.
INFO  [2024-12-24 09:08:43] Design: 1 MS run per mixture.
INFO  [2024-12-24 09:08:43] Design: group comparison design (Different conditions contains different biological subjects).
INFO  [2024-12-24 09:08:43] Model fitting for 85 proteins.

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[1] "+++++++++ In Data Comparison +++++++++"
[1] "+++++++++ In preprocessData +++++++++"
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
INFO  [2024-12-24 09:08:51] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:51] ** Fractionation handled.
INFO  [2024-12-24 09:08:51] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:51] ** Use all features that the dataset originally has.
INFO  [2024-12-24 09:08:52] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:52] ** Fractionation handled.
INFO  [2024-12-24 09:08:52] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:52] ** Use all features that the dataset originally has.

  |                                                                            
  |                                                                      |   0%
  |                                                                            
  |                                                                      |   0%[1] "+++++++++ In Data Comparison +++++++++"
[1] "+++++++++ In preprocessData +++++++++"
Reached in evidence
Reached in proteins_group
Reached in maxq annot
Reached in ump annot
Reached in ump annot
Reached in unmod
Reached in get_data
File type is sample 
INFO  [2024-12-24 09:08:59] ** Features with one or two measurements across runs are removed.
INFO  [2024-12-24 09:08:59] ** Fractionation handled.
INFO  [2024-12-24 09:08:59] ** Updated quantification data to make balanced design. Missing values are marked by NA
INFO  [2024-12-24 09:08:59] ** Use all features that the dataset originally has.

  |                                                                            
  |                                                                      |   0%[ FAIL 0 | WARN 0 | SKIP 0 | PASS 114 ]
> 
> proc.time()
   user  system elapsed 
 41.229   0.862  42.021 

Example timings

MSstatsShiny.Rcheck/MSstatsShiny-Ex.timings

nameusersystemelapsed
QC_check0.0000.0000.001
annotation.mine0.0070.0000.006
annotation.mq0.0030.0000.004
annotation.pd0.0030.0000.004
apply_adj7.1180.2237.357
dia_skyline_model0.0400.0000.039
dia_skyline_summarized0.2880.0960.384
evidence0.0530.0040.058
example_dia_skyline0.2070.0080.215
example_skyline_annotation0.0010.0020.002
expdesServer000
expdesUI000
groupComparisonPlots20.3920.0170.410
helpUI000
homeUI000
launch_MSstatsShiny0.0000.0000.001
lf_model0.3050.0000.306
lf_summarization_loop4.5230.2074.608
loadpageServer000
loadpageUI000
msstatsHelpUI000
msstatsTmtHelpUI000
proteinGroups0.1870.0040.190
qcServer000
qcUI000
radioTooltip0.0050.0000.005
raw.mine0.1220.0040.126
raw.om0.0460.0000.046
raw.pd0.0660.0000.066
server0.0010.0000.000
statmodelServer000
statmodelUI000
tmt_model8.3390.0398.241
tmt_pd_model0.1070.0000.107
tmt_pd_summarized0.9720.1201.095
tmt_summarization_loop7.1650.0447.093
uiObject000
xy_str000