This page was generated on 2024-12-24 11:41 -0500 (Tue, 24 Dec 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences"
| 4754 |
palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences"
| 4472 |
lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences"
| 4426 |
kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences"
| 4381 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences"
| 4373 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
BUILD BIN results for MEDME on palomino7
To the developers/maintainers of the MEDME package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MEDME.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
|
raw results
Summary
Command output
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###
### Running command:
###
### rm -rf MEDME.buildbin-libdir && mkdir MEDME.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=MEDME.buildbin-libdir MEDME_1.67.0.tar.gz
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* installing *source* package 'MEDME' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
gcc -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c MEDMEweight.c -o MEDMEweight.o
MEDMEweight.c: In function 'MEDMEweight':
MEDMEweight.c:90:33: warning: 'B' may be used uninitialized [-Wmaybe-uninitialized]
90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
| ^~~~~~~~
MEDMEweight.c:36:10: note: 'B' was declared here
36 | double B,C,D,E, Min, Max, Mlim;
| ^
MEDMEweight.c:89:9: warning: 'C' may be used uninitialized [-Wmaybe-uninitialized]
89 | if(Mlim < C) {Mlim = C;}
| ^
MEDMEweight.c:36:12: note: 'C' was declared here
36 | double B,C,D,E, Min, Max, Mlim;
| ^
MEDMEweight.c:88:9: warning: 'D' may be used uninitialized [-Wmaybe-uninitialized]
88 | if(Mlim > D) {Mlim = D;} // the model is only meaningful for MeDIPw in (C,D)
| ^
MEDMEweight.c:36:14: note: 'D' was declared here
36 | double B,C,D,E, Min, Max, Mlim;
| ^
MEDMEweight.c:90:33: warning: 'E' may be used uninitialized [-Wmaybe-uninitialized]
90 | AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B));
| ^~~~~~~~
MEDMEweight.c:36:16: note: 'E' was declared here
36 | double B,C,D,E, Min, Max, Mlim;
| ^
MEDMEweight.c:92:9: warning: 'Min' may be used uninitialized [-Wmaybe-uninitialized]
92 | if(AMSfinal[i] < Min) {AMSfinal[i] = Min;}
| ^
MEDMEweight.c:36:19: note: 'Min' was declared here
36 | double B,C,D,E, Min, Max, Mlim;
| ^~~
MEDMEweight.c:91:9: warning: 'Max' may be used uninitialized [-Wmaybe-uninitialized]
91 | if(AMSfinal[i] > Max) {AMSfinal[i] = Max;}
| ^
MEDMEweight.c:36:24: note: 'Max' was declared here
36 | double B,C,D,E, Min, Max, Mlim;
| ^~~
MEDMEweight.c:78:19: warning: 'weight' may be used uninitialized [-Wmaybe-uninitialized]
78 | weightSum = weightSum + weight;
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
MEDMEweight.c:30:10: note: 'weight' was declared here
30 | double weight, relPos;
| ^~~~~~
gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR
installing to E:/biocbuild/bbs-3.21-bioc/meat/MEDME.buildbin-libdir/00LOCK-MEDME/00new/MEDME/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MEDME' as MEDME_1.67.0.zip
* DONE (MEDME)