Back to Multiple platform build/check report for BioC 3.24:   simplified   long
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

This page was generated on 2026-05-06 11:34 -0400 (Wed, 06 May 2026).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.4 LTS)x86_644.6.0 RC (2026-04-17 r89917) -- "Because it was There" 4878
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4663
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 802/2366HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GDCRNATools 1.33.0  (landing page)
Ruidong Li
Snapshot Date: 2026-05-05 13:45 -0400 (Tue, 05 May 2026)
git_url: https://git.bioconductor.org/packages/GDCRNATools
git_branch: devel
git_last_commit: abb49bf
git_last_commit_date: 2026-04-28 08:47:09 -0400 (Tue, 28 Apr 2026)
nebbiolo2Linux (Ubuntu 24.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
taishanLinux (openEuler 24.03 LTS) / aarch64  ERROR    ERROR  skipped
See other builds for GDCRNATools in R Universe.


INSTALL results for GDCRNATools on taishan

To the developers/maintainers of the GDCRNATools package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GDCRNATools.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: GDCRNATools
Version: 1.33.0
Command: /home/biocbuild/R/R/bin/R CMD INSTALL GDCRNATools
StartedAt: 2026-05-05 00:13:52 -0000 (Tue, 05 May 2026)
EndedAt: 2026-05-05 00:13:53 -0000 (Tue, 05 May 2026)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD INSTALL GDCRNATools
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-4.5.0/site-library’
ERROR: dependencies ‘clusterProfiler’, ‘DOSE’ are not available for package ‘GDCRNATools’
Perhaps try a variation of:
install.packages(c('clusterProfiler', 'DOSE'))
* removing ‘/home/biocbuild/R/R-4.5.0/site-library/GDCRNATools’