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This page was generated on 2024-11-28 12:16 -0500 (Thu, 28 Nov 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4748
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4459
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4398
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 549/2272HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DESpace 1.7.0  (landing page)
Peiying Cai
Snapshot Date: 2024-11-27 13:40 -0500 (Wed, 27 Nov 2024)
git_url: https://git.bioconductor.org/packages/DESpace
git_branch: devel
git_last_commit: 2b11443
git_last_commit_date: 2024-10-29 11:19:08 -0500 (Tue, 29 Oct 2024)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped


BUILD results for DESpace on lconway

To the developers/maintainers of the DESpace package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DESpace.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: DESpace
Version: 1.7.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DESpace
StartedAt: 2024-11-27 16:37:38 -0500 (Wed, 27 Nov 2024)
EndedAt: 2024-11-27 16:38:37 -0500 (Wed, 27 Nov 2024)
EllapsedTime: 59.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DESpace
###
##############################################################################
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* checking for file ‘DESpace/DESCRIPTION’ ... OK
* preparing ‘DESpace’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘DESpace.Rmd’ using rmarkdown

Quitting from lines 106-130 [load-example-data] (DESpace.Rmd)
Error: processing vignette 'DESpace.Rmd' failed with diagnostics:
there is no package called 'spatialLIBD'
--- failed re-building ‘DESpace.Rmd’

SUMMARY: processing the following file failed:
  ‘DESpace.Rmd’

Error: Vignette re-building failed.
Execution halted