| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-01-15 11:35 -0500 (Thu, 15 Jan 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2025-12-22 r89219) -- "Unsuffered Consequences" | 4848 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences" | 4628 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 553/2343 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DELocal 1.11.0 (landing page) Rishi Das Roy
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
|
To the developers/maintainers of the DELocal package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DELocal.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: DELocal |
| Version: 1.11.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DELocal |
| StartedAt: 2026-01-14 16:09:04 -0500 (Wed, 14 Jan 2026) |
| EndedAt: 2026-01-14 16:09:28 -0500 (Wed, 14 Jan 2026) |
| EllapsedTime: 23.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DELocal
###
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* checking for file ‘DELocal/DESCRIPTION’ ... OK
* preparing ‘DELocal’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘DELocal.Rmd’ using rmarkdown
Quitting from DELocal.Rmd:120-123 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `as.vector()`:
! cannot coerce type 'object' to vector of type 'character'
---
Backtrace:
▆
1. └─DELocal::plotNeighbourhood(...)
2. └─base::message(results$plot)
3. └─base::.makeMessage(..., domain = domain, appendLF = appendLF)
4. └─base::lapply(list(...), as.character)
5. ├─base (local) FUN(X[[i]], ...)
6. └─base::as.character.default(X[[i]], ...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'DELocal.Rmd' failed with diagnostics:
cannot coerce type 'object' to vector of type 'character'
--- failed re-building ‘DELocal.Rmd’
SUMMARY: processing the following file failed:
‘DELocal.Rmd’
Error: Vignette re-building failed.
Execution halted