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This page was generated on 2025-05-19 12:08 -0400 (Mon, 19 May 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4749
palomino8Windows Server 2022 Datacenterx644.5.0 (2025-04-11 ucrt) -- "How About a Twenty-Six" 4511
lconwaymacOS 12.7.1 Montereyx86_644.5.0 Patched (2025-04-21 r88169) -- "How About a Twenty-Six" 4548
kjohnson3macOS 13.7.1 Venturaarm644.5.0 Patched (2025-04-21 r88169) -- "How About a Twenty-Six" 4489
taishanLinux (openEuler 24.03 LTS)aarch644.5.0 (2025-04-11) -- "How About a Twenty-Six" 4453
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 399/2304HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNViz 1.17.0  (landing page)
Rebecca Greenblatt
Snapshot Date: 2025-05-18 13:25 -0400 (Sun, 18 May 2025)
git_url: https://git.bioconductor.org/packages/CNViz
git_branch: devel
git_last_commit: 8ab4802
git_last_commit_date: 2025-04-15 12:26:10 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  ERROR    ERROR  skippedskipped
taishanLinux (openEuler 24.03 LTS) / aarch64  ERROR    ERROR  skipped

BUILD results for CNViz on lconway

To the developers/maintainers of the CNViz package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNViz.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: CNViz
Version: 1.17.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CNViz
StartedAt: 2025-05-18 16:20:28 -0400 (Sun, 18 May 2025)
EndedAt: 2025-05-18 16:20:29 -0400 (Sun, 18 May 2025)
EllapsedTime: 1.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data CNViz
###
##############################################################################
##############################################################################


* checking for file ‘CNViz/DESCRIPTION’ ... OK
* preparing ‘CNViz’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘karyoploteR’, ‘CopyNumberPlots’ are not available for package ‘CNViz’
Perhaps try a variation of:
install.packages(c('karyoploteR', 'CopyNumberPlots'))
* removing ‘/private/tmp/RtmpI7u9rj/Rinst6b3e73a1518e/CNViz’
      -----------------------------------
ERROR: package installation failed