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This page was generated on 2024-10-24 11:04 -0400 (Thu, 24 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 3656
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 188/2281HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocOncoTK 1.25.1  (landing page)
VJ Carey
Snapshot Date: 2024-10-23 19:16 -0400 (Wed, 23 Oct 2024)
git_url: https://git.bioconductor.org/packages/BiocOncoTK
git_branch: devel
git_last_commit: 30554ea
git_last_commit_date: 2024-06-03 13:07:32 -0400 (Mon, 03 Jun 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  ERROR    ERROR  skipped

INSTALL results for BiocOncoTK on nebbiolo1

To the developers/maintainers of the BiocOncoTK package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiocOncoTK.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: BiocOncoTK
Version: 1.25.1
Command: /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL BiocOncoTK
StartedAt: 2024-10-24 03:26:40 -0400 (Thu, 24 Oct 2024)
EndedAt: 2024-10-24 03:26:43 -0400 (Thu, 24 Oct 2024)
EllapsedTime: 2.2 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL BiocOncoTK
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* installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’
ERROR: dependency ‘curatedTCGAData’ is not available for package ‘BiocOncoTK’
Perhaps try a variation of:
install.packages('curatedTCGAData')
* removing ‘/home/biocbuild/bbs-3.21-bioc/R/site-library/BiocOncoTK’