Back to Multiple platform build/check report for BioC 3.21: simplified long |
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This page was generated on 2024-12-24 11:46 -0500 (Tue, 24 Dec 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" | 4754 |
palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" | 4472 |
lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4426 |
kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" | 4381 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" | 4373 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 13/2274 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
ACME 2.63.0 (landing page) Sean Davis
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | OK | OK | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | ERROR | ERROR | skipped | ||||||||||
To the developers/maintainers of the ACME package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ACME.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: ACME |
Version: 2.63.0 |
Command: /home/biocbuild/R/R/bin/R CMD INSTALL ACME |
StartedAt: 2024-12-23 19:27:10 -0000 (Mon, 23 Dec 2024) |
EndedAt: 2024-12-23 19:27:11 -0000 (Mon, 23 Dec 2024) |
EllapsedTime: 0.9 seconds |
RetCode: 1 |
Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL ACME ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library’ * installing *source* package ‘ACME’ ... ** using staged installation ** libs using C compiler: ‘aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0’ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-gcc -I"/home/biocbuild/R/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c windowChisq.c -o windowChisq.o windowChisq.c: In function ‘windowChisq’: windowChisq.c:58:21: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] 58 | firstprobe>0) { | ~~~~~~~~~~^~ windowChisq.c:63:20: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses] 63 | lastprobe<(na-1)) { | ~~~~~~~~~^~~~~~~ windowChisq.c:21:11: warning: unused variable ‘xa’ [-Wunused-variable] 21 | double *xa,*xlocations,*xchivals; | ^~ windowChisq.c: At top level: windowChisq.c:86:20: error: initialization of ‘void * (*)(void)’ from incompatible pointer type ‘struct SEXPREC * (*)(struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *, struct SEXPREC *)’ [-Wincompatible-pointer-types] 86 | {"windowChisq",&windowChisq,5}, | ^ windowChisq.c:86:20: note: (near initialization for ‘callMethods[0].fun’) make: *** [/home/biocbuild/R/R/etc/Makeconf:195: windowChisq.o] Error 1 ERROR: compilation failed for package ‘ACME’ * removing ‘/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/ACME’ * restoring previous ‘/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/ACME’