Package: waveTiling

Version: 1.26.0

Command: rm -rf waveTiling.buildbin-libdir && mkdir waveTiling.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=waveTiling.buildbin-libdir waveTiling_1.26.0.tar.gz

StartedAt: 2019-10-16 10:26:28 -0400 (Wed, 16 Oct 2019)

EndedAt: 2019-10-16 10:27:57 -0400 (Wed, 16 Oct 2019)

EllapsedTime: 89.0 seconds

RetCode: 0

Status:  OK

PackageFile: waveTiling_1.26.0.zip

PackageFileSize: 914.7 KiB

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### Running command:
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###   rm -rf waveTiling.buildbin-libdir && mkdir waveTiling.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=waveTiling.buildbin-libdir waveTiling_1.26.0.tar.gz
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install for i386

* installing *source* package 'waveTiling' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c waveTiling.c -o waveTiling.o
waveTiling.c: In function 'MAPMARG':
waveTiling.c:10:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
waveTiling.c: In function 'MAPMARGEQSMOOTH':
waveTiling.c:43:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
waveTiling.c: In function 'MAPMARGIMP':
waveTiling.c:81:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
waveTiling.c: In function 'MAPMARGIMPEQSMOOTH':
waveTiling.c:114:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o waveTiling.dll tmp.def waveTiling.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/waveTiling.buildbin-libdir/00LOCK-waveTiling/00new/waveTiling/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'waveTiling'
    finding HTML links ... done
    GenomeInfo-class                        html  
    MapFilterProbe-class                    html  
    WaveTilingFeatureSet-class              html  
    finding level-2 HTML links ... done

    WfmFit-class                            html  
    WfmFitCircadian-class                   html  
    WfmFitCustom-class                      html  
    WfmFitFactor-class                      html  
    WfmFitTime-class                        html  
    WfmInf-class                            html  
    WfmInfCompare-class                     html  
    WfmInfCustom-class                      html  
    WfmInfEffects-class                     html  
    WfmInfMeans-class                       html  
    WfmInfOverallMean-class                 html  
    addPheno                                html  
    bgCorrQn                                html  
    cel2TilingFeatureSet                    html  
    filterOverlap                           html  
    getNonAnnotatedRegions                  html  
    getSigGenes                             html  
    makeContrasts                           html  
    makeDesign                              html  
    plotWfm                                 html  
    selectProbesFromFilterOverlap           html  
    selectProbesFromTilingFeatureSet        html  
    wfm.fit                                 html  
    wfm.inference                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'waveTiling' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c waveTiling.c -o waveTiling.o
waveTiling.c: In function 'MAPMARG':
waveTiling.c:10:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
waveTiling.c: In function 'MAPMARGEQSMOOTH':
waveTiling.c:43:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
waveTiling.c: In function 'MAPMARGIMP':
waveTiling.c:81:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
waveTiling.c: In function 'MAPMARGIMPEQSMOOTH':
waveTiling.c:114:11: warning: unused variable 'n' [-Wunused-variable]
 int i,j,m,n,Jcount=0;
           ^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o waveTiling.dll tmp.def waveTiling.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/waveTiling.buildbin-libdir/waveTiling/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'waveTiling' as waveTiling_1.26.0.zip
* DONE (waveTiling)