Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-10-16 12:35:13 -0400 (Wed, 16 Oct 2019).
Package 1274/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
psygenet2r 1.16.0 Alba Gutierrez-Sacristan
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
Package: psygenet2r |
Version: 1.16.0 |
Command: rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.16.0.tar.gz |
StartedAt: 2019-10-16 09:58:00 -0400 (Wed, 16 Oct 2019) |
EndedAt: 2019-10-16 09:58:47 -0400 (Wed, 16 Oct 2019) |
EllapsedTime: 47.6 seconds |
RetCode: 0 |
Status: OK |
PackageFile: psygenet2r_1.16.0.zip |
PackageFileSize: 1.761 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.16.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'psygenet2r' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Note: possible error in 'psygenetGene(x, databse = "ALL")': unused argument (databse = "ALL") Note: possible error in 'psygenetGene(x, databse = "ALL")': unused argument (databse = "ALL") Note: possible error in 'psygenetGene(x, databse = "ALL")': unused argument (databse = "ALL") Note: possible error in 'psygenetGene(x, databse = "ALL", ': unused argument (databse = "ALL") ** help *** installing help indices converting help for package 'psygenet2r' finding HTML links ... done DataGeNET.Psy-class html JaccardIndexPsy-class html enrichedPD-methods html extract html extractSentences html geneAttrPlot-methods html getUMLs-methods html jaccardEstimation-methods html ndisease html ngene html pantherGraphic-methods html plot-DataGeNET.Psy-ANY-method html plot-JaccardIndexPsy-ANY-method html psygenet2r html psygenetDisease-methods html psygenetDiseaseSentences html psygenetGene-methods html psygenetGeneSentences html qr html topAnatEnrichment-methods html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp2nTED4/R.INSTALL18f068d06dd9/psygenet2r/man/topAnatEnrichment-methods.Rd:21: file link 'runTest' in package 'topGO' does not exist and so has been treated as a topic universe html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'psygenet2r' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'psygenet2r' as psygenet2r_1.16.0.zip * DONE (psygenet2r)