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INSTALL report for GMRP on tokay2

This page was generated on 2019-10-16 12:41:46 -0400 (Wed, 16 Oct 2019).

Package 690/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GMRP 1.12.0
Yuan-De Tan
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/GMRP
Branch: RELEASE_3_9
Last Commit: 07f7c16
Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: GMRP
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GMRP_1.12.0.tar.gz && rm -rf GMRP.buildbin-libdir && mkdir GMRP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GMRP.buildbin-libdir GMRP_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GMRP_1.12.0.zip && rm GMRP_1.12.0.tar.gz GMRP_1.12.0.zip
StartedAt: 2019-10-15 19:57:33 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:58:22 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 49.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GMRP_1.12.0.tar.gz && rm -rf GMRP.buildbin-libdir && mkdir GMRP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GMRP.buildbin-libdir GMRP_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GMRP_1.12.0.zip && rm GMRP_1.12.0.tar.gz GMRP_1.12.0.zip
###
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100  372k  100  372k    0     0  3920k      0 --:--:-- --:--:-- --:--:-- 4233k

install for i386

* installing *source* package 'GMRP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'GMRP'
** help
*** installing help indices
  converting help for package 'GMRP'
    finding HTML links ... done
    GMRP-package                            html  
    SNP358.data                             html  
    SNP368annot.data                        html  
    beta.data                               html  
    cad.data                                html  
    chrp                                    html  
    fmerge                                  html  
    lpd.data                                html  
    mktable                                 html  
    path                                    html  
    pathdiagram                             html  
    pathdiagram2                            html  
    snpPositAnnot                           html  
    ucscannot                               html  
** building package indices
** installing vignettes
   'GMRP.Rnw' 
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'GMRP'
Warning: Package 'GMRP' is deprecated and will be removed from Bioconductor
  version 3.7
** testing if installed package can be loaded from final location
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'GMRP'
Warning: Package 'GMRP' is deprecated and will be removed from Bioconductor
  version 3.7
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GMRP' ...
** testing if installed package can be loaded
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'GMRP'
Warning: Package 'GMRP' is deprecated and will be removed from Bioconductor
  version 3.7
* MD5 sums
packaged installation of 'GMRP' as GMRP_1.12.0.zip
* DONE (GMRP)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'GMRP' successfully unpacked and MD5 sums checked