Farhad Shokoohi
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/DMCHMM |
| Branch: RELEASE_3_9 |
| Last Commit: e1b82fe |
| Last Changed Date: 2019-05-02 11:54:08 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:39:12 -0400 (Wed, 16 Oct 2019).
| Package 446/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DMCHMM 1.6.0 Farhad Shokoohi
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: DMCHMM |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DMCHMM_1.6.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.6.0.zip && rm DMCHMM_1.6.0.tar.gz DMCHMM_1.6.0.zip |
| StartedAt: 2019-10-15 20:20:08 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:21:30 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 81.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DMCHMM_1.6.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.6.0.zip && rm DMCHMM_1.6.0.tar.gz DMCHMM_1.6.0.zip
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install for i386
* installing *source* package 'DMCHMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** help
*** installing help indices
converting help for package 'DMCHMM'
finding HTML links ... done
BSDMCs-class html
BSData-class html
finding level-2 HTML links ... done
DMCHMM-package html
cBSDMCs-method html
cBSData-method html
combine-method html
data html
findDMCs-method html
manhattanDMCs-method html
methHMEM-method html
methHMMCMC-method html
methLevels-method html
methReads-method html
methStates-method html
params html
qqDMCs-method html
readBismark-method html
totalReads-method html
writeBED-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DMCHMM' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
* MD5 sums
packaged installation of 'DMCHMM' as DMCHMM_1.6.0.zip
* DONE (DMCHMM)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'DMCHMM' successfully unpacked and MD5 sums checked