Guangchuang Yu
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/ChIPseeker |
| Branch: RELEASE_3_9 |
| Last Commit: b2e04ac |
| Last Changed Date: 2019-05-02 11:53:48 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:30:00 -0400 (Wed, 16 Oct 2019).
| Package 262/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ChIPseeker 1.20.0 Guangchuang Yu
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: ChIPseeker |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ChIPseeker_1.20.0.tar.gz && rm -rf ChIPseeker.buildbin-libdir && mkdir ChIPseeker.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPseeker.buildbin-libdir ChIPseeker_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ChIPseeker_1.20.0.zip && rm ChIPseeker_1.20.0.tar.gz ChIPseeker_1.20.0.zip |
| StartedAt: 2019-10-15 20:44:14 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:45:22 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 68.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ChIPseeker_1.20.0.tar.gz && rm -rf ChIPseeker.buildbin-libdir && mkdir ChIPseeker.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPseeker.buildbin-libdir ChIPseeker_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ChIPseeker_1.20.0.zip && rm ChIPseeker_1.20.0.tar.gz ChIPseeker_1.20.0.zip
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install for i386
* installing *source* package 'ChIPseeker' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ChIPseeker'
finding HTML links ... done
ChIPseeker-package html
annotatePeak html
as.GRanges html
as.data.frame.csAnno html
covplot html
csAnno-class html
dotFun html
downloadGEObedFiles html
downloadGSMbedFiles html
dropAnno html
enrichAnnoOverlap html
enrichPeakOverlap html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpOo4dhR/R.INSTALL19242658742c/ChIPseeker/man/enrichPeakOverlap.Rd:26: file link 'mclapply' in package 'parallel' does not exist and so has been treated as a topic
getBioRegion html
getGEOInfo html
getGEOgenomeVersion html
getGEOspecies html
getGeneAnno html
getGenomicAnnotation html
getNearestFeatureIndicesAndDistances html
getPromoters html
getSampleFiles html
getTagMatrix html
info html
overlap html
peakHeatmap html
plotAnnoBar-methods html
plotAnnoBar.data.frame html
plotAnnoPie-methods html
plotAnnoPie.csAnno html
plotAvgProf html
plotAvgProf2 html
plotDistToTSS-methods html
plotDistToTSS.data.frame html
readPeakFile html
reexports html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpOo4dhR/R.INSTALL19242658742c/ChIPseeker/man/reexports.Rd:14: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
seq2gene html
show-methods html
shuffle html
tagHeatmap html
upsetplot-methods html
vennpie-methods html
vennplot html
vennplot.peakfile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ChIPseeker' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ChIPseeker' as ChIPseeker_1.20.0.zip
* DONE (ChIPseeker)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ChIPseeker' successfully unpacked and MD5 sums checked