A.Gabor
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/CellNOptR |
| Branch: RELEASE_3_9 |
| Last Commit: d0deb0e |
| Last Changed Date: 2019-05-02 11:53:33 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:00:42 -0400 (Wed, 16 Oct 2019).
| Package 232/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| CellNOptR 1.30.0 A.Gabor
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | [ OK ] | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: CellNOptR |
| Version: 1.30.0 |
| Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL CellNOptR |
| StartedAt: 2019-10-15 18:40:24 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 18:40:40 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 16.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL CellNOptR
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘CellNOptR’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -I./include -fpic -g -O2 -Wall -c getFit.c -o getFit.o
getFit.c: In function ‘getFit’:
getFit.c:47:6: warning: unused variable ‘nReacs’ [-Wunused-variable]
int nReacs = INTEGER(nReacs_in)[0];
^~~~~~
getFit.c:42:6: warning: unused variable ‘selCounter’ [-Wunused-variable]
int selCounter = 0;
^~~~~~~~~~
getFit.c:41:6: warning: unused variable ‘selection’ [-Wunused-variable]
int selection[40];
^~~~~~~~~
getFit.c:40:6: warning: unused variable ‘or_max’ [-Wunused-variable]
int or_max = 0;
^~~~~~
getFit.c:39:6: warning: unused variable ‘curr_max’ [-Wunused-variable]
int curr_max = 0;
^~~~~~~~
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -I./include -fpic -g -O2 -Wall -c simulatorT1.c -o simulatorT1.o
simulatorT1.c: In function ‘simulatorT1’:
simulatorT1.c:502:20: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
if (MA[i][j]<0.95 & MA[i][j]>0.05) // actually we could check if they are exatly 0 or 1
~~~~~~~~^~~~~
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -I./include -fpic -g -O2 -Wall -c simulatorTN.c -o simulatorTN.o
gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o CellNOptR.so getFit.o simulatorT1.o simulatorTN.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-CellNOptR/00new/CellNOptR/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
‘CellNOptR-vignette.Rnw’
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CellNOptR)