Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 12:28:35 -0400 (Tue, 09 Apr 2019).
Package 1635/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
treeio 1.7.5 Guangchuang Yu
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: treeio |
Version: 1.7.5 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/treeio_1.7.5.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.7.5.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL treeio_1.7.5.zip && rm treeio_1.7.5.tar.gz treeio_1.7.5.zip |
StartedAt: 2019-04-08 18:54:56 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 18:56:14 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 78.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/treeio_1.7.5.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.7.5.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL treeio_1.7.5.zip && rm treeio_1.7.5.tar.gz treeio_1.7.5.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 499k 100 499k 0 0 4431k 0 --:--:-- --:--:-- --:--:-- 4713k install for i386 * installing *source* package 'treeio' ... ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'treeio' finding HTML links ... done Nnode.treedata html as.treedata html beast-mrbayes-parser html drop.tip-methods html get-placements html get.tree html get.treetext-methods html getNodeNum html is.ggtree html isTip html jplace-class html label_branch_paml html mask html merge_tree html phyPML html print.beastList html raxml2nwk html read-jtree html read.astral html read.codeml html read.codeml_mlc html read.fasta html read.hyphy html read.hyphy.seq html read.iqtree html read.jplace html read.newick html read.nhx html read.paml_rst html read.phylip html read.phylip.seq html read.phylip.tree html read.phyloT html read.r8s html read.raxml html reexports html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:35: file link 'Nnode' in package 'ape' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:35: file link 'Ntip' in package 'ape' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:35: file link 'is.rooted' in package 'ape' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:37: file link 'full_join' in package 'dplyr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:39: file link '%>%' in package 'magrittr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:41: file link 'data_frame' in package 'tibble' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:43: file link 'get.fields' in package 'tidytree' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpeQSxku/R.INSTALL10884350257d/treeio/man/reexports.Rd:43: file link 'get.data' in package 'tidytree' does not exist and so has been treated as a topic rename_taxa html rescale_tree html root-method html taxa_rename html tree_subset html write-jtree html write.beast html write.jplace html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'treeio' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'treeio' as treeio_1.7.5.zip * DONE (treeio) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'treeio' successfully unpacked and MD5 sums checked